Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS11Q9H270 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS11Q9H270 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VPS11Q9H270 RNA5SP46-201ENST00000362370 120 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 RNU4-91P-201ENST00000364778 135 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS11Q9H270 RNU6-876P-201ENST00000391295 104 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 PRRC2CP1-201ENST00000404428 159 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AL133388.1-201ENST00000404509 287 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 RN7SKP240-201ENST00000410583 375 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 HMGN1P20-201ENST00000411849 300 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS11Q9H270 PRELID3BP11-201ENST00000414230 479 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS11Q9H270 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS11Q9H270 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS11Q9H270 AC093155.2-201ENST00000420734 937 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS11Q9H270 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS11Q9H270 MTND1P28-201ENST00000435623 950 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AC092427.1-201ENST00000439177 601 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS11Q9H270 UBE2V1P3-201ENST00000439651 417 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS11Q9H270 AC105399.1-202ENST00000447303 205 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AC104306.1-201ENST00000449702 371 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
VPS11Q9H270 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS11Q9H270 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS11Q9H270 AC079168.1-201ENST00000458741 345 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AC108161.1-201ENST00000461060 402 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AL672167.3-201ENST00000465951 960 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AC010683.1-201ENST00000473673 378 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 RPL7P18-201ENST00000478965 734 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
VPS11Q9H270 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS11Q9H270 AC093824.1-201ENST00000508796 343 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VPS11Q9H270 RNA5SP135-201ENST00000517019 125 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AC105031.1-201ENST00000518550 476 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 OR5AK1P-201ENST00000524837 922 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AC005363.1-201ENST00000530779 351 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 OR4C2P-201ENST00000530855 1064 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS11Q9H270 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS11Q9H270 BNIP3P1-201ENST00000547295 580 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS11Q9H270 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS11Q9H270 MIR4716-201ENST00000579628 84 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AC017100.2-201ENST00000584628 355 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS11Q9H270 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS11Q9H270 DUXAP4-201ENST00000603046 613 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS11Q9H270 AL022154.1-201ENST00000604698 785 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS11Q9H270 AC091304.9-201ENST00000612091 226 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 AL096712.1-201ENST00000614561 159 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS11Q9H270 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.26□□□□□ -1.57
VPS11Q9H270 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS11Q9H270 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS11Q9H270 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VPS11Q9H270 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS11Q9H270 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS11Q9H270 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS11Q9H270 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.26□□□□□ -1.57
VPS11Q9H270 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS11Q9H270 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS11Q9H270 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS11Q9H270 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS11Q9H270 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS11Q9H270 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS11Q9H270 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.25□□□□□ -1.57
VPS11Q9H270 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS11Q9H270 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS11Q9H270 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS11Q9H270 AP005901.5-201ENST00000545779 1796 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
VPS11Q9H270 Y_RNA.450-201ENST00000384198 113 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS11Q9H270 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 OR2AH1P-201ENST00000425717 928 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS11Q9H270 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS11Q9H270 MTCO1P54-201ENST00000430139 712 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 ATP5F1P1-201ENST00000433775 569 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS11Q9H270 SUMO2P3-201ENST00000438311 288 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 GDI2P2-201ENST00000445131 608 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS11Q9H270 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS11Q9H270 DPPA3P1-201ENST00000448050 469 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 RPL23AP15-201ENST00000450202 459 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.25□□□□□ -1.57
VPS11Q9H270 VPS26AP1-201ENST00000483197 979 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.25□□□□□ -1.57
VPS11Q9H270 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.25□□□□□ -1.57
VPS11Q9H270 DYNLL1P6-201ENST00000503440 264 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms