Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC022028.1-201ENST00000412054 408 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 EI24P4-201ENST00000423683 1078 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC093655.2-201ENST00000425735 631 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC010975.2-201ENST00000427781 588 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 RPL37P25-201ENST00000507308 276 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 RNU6-488P-201ENST00000515918 99 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 DEFB131D-201ENST00000526803 184 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 NDUFB4P11-201ENST00000560510 395 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 MIR4646-201ENST00000580775 63 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC233702.9-201ENST00000581528 203 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC015871.2-201ENST00000603605 948 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC005084.1-201ENST00000605160 304 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC100827.5-201ENST00000615883 426 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AL357080.1-201ENST00000617394 239 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC090527.3-201ENST00000619041 548 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 CYP4F35P-202ENST00000636121 390 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC090017.1-201ENST00000548612 1779 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 AC092162.3-201ENST00000624511 1624 ntBASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
AMBRA1Q9C0C7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
AMBRA1Q9C0C7 MUC2-202ENST00000613187 4845 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 TEX21P-201ENST00000447107 1476 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC016716.1-201ENST00000265882 708 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 U3.2-201ENST00000362981 210 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 SNORA2.3-201ENST00000383920 135 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 OR6C69P-201ENST00000394268 893 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 MTCO3P31-201ENST00000405526 789 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 RN7SKP33-201ENST00000410942 340 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 ATG4AP1-201ENST00000416893 538 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 FNDC3CP-201ENST00000420795 1155 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AL953862.1-201ENST00000423016 168 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC108075.1-201ENST00000424692 529 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC073335.1-201ENST00000427776 363 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AL831737.1-201ENST00000441288 271 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC004980.3-201ENST00000447046 365 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 RNU6-1218P-201ENST00000458990 108 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 GYG1P1-201ENST00000460864 698 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 RN7SL441P-201ENST00000492388 296 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 BNIP3P41-201ENST00000503774 571 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 MTND2P33-201ENST00000506452 1031 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 RN7SKP46-201ENST00000515942 234 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC016957.1-201ENST00000534895 309 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC090502.2-201ENST00000549267 280 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC074029.1-201ENST00000552531 1044 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC068714.1-201ENST00000559623 800 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC136619.2-201ENST00000563361 631 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC008687.2-201ENST00000597865 520 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AL355816.1-201ENST00000607951 118 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AP001521.1-201ENST00000609150 300 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 AC013476.2-201ENST00000614456 459 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.71□□□□□ -1.66
AMBRA1Q9C0C7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms