Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
UPF3BQ9BZI7 MTND4P10-201ENST00000446199 1363 ntBASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 RNA5SP235-201ENST00000365411 114 ntBASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 MIR218-2-201ENST00000385006 110 ntBASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 AC007066.1-201ENST00000392902 381 ntBASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 AC017079.2-201ENST00000416102 485 ntBASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 OR6K4P-201ENST00000423179 955 ntBASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 NPM1P35-201ENST00000533043 868 ntBASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 AGGF1P8-201ENST00000562979 1000 ntBASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 AC090953.1-201ENST00000604305 1092 ntBASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 AC115621.1-201ENST00000604653 858 ntBASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 U6.105-201ENST00000637379 88 ntBASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 AC007823.1-201ENST00000569932 1566 ntBASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UPF3BQ9BZI7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 XIAPP3-201ENST00000312918 795 ntBASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 RNU6-697P-201ENST00000363348 107 ntBASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 DBIP2-201ENST00000419076 262 ntBASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 AC006989.1-201ENST00000427212 131 ntBASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 FTH1P6-201ENST00000430768 320 ntBASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 CYCSP43-201ENST00000438233 310 ntBASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 RPS29P2-201ENST00000479278 136 ntBASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 SETP6-201ENST00000479329 568 ntBASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 RPL23AP73-201ENST00000492507 471 ntBASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 SNORA70.18-201ENST00000516696 98 ntBASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 AL592494.3-201ENST00000609485 464 ntBASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 AC022960.2-201ENST00000616300 666 ntBASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 MIR7975-201ENST00000619350 68 ntBASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 AC024023.1-201ENST00000624530 922 ntBASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
UPF3BQ9BZI7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 RNA5SP51-201ENST00000364750 119 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 RNU6-225P-201ENST00000384613 103 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 AP000907.1-201ENST00000428428 510 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 MRPS31P2-201ENST00000451581 518 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 ANP32BP2-201ENST00000454525 545 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 SNRPGP5-201ENST00000456003 220 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 RPL23AP12-201ENST00000467573 473 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 AP000926.1-201ENST00000479573 241 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 METTL15P1-201ENST00000481421 1045 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 RN7SL293P-201ENST00000481765 281 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 SNORA70.14-201ENST00000516205 110 ntBASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.25□□□□□ -1.73
UPF3BQ9BZI7 AL109741.3-201ENST00000561748 592 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms