Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 HAUS1P1-201ENST00000505275 832 ntBASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 RNA5SP164-201ENST00000516533 110 ntBASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 PAICSP4-201ENST00000517543 1253 ntBASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AC104997.1-201ENST00000519761 717 ntBASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 CYCSP30-201ENST00000546447 172 ntBASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 MIR5187-201ENST00000583479 76 ntBASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AC067852.3-201ENST00000589177 561 ntBASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AC022387.2-201ENST00000604050 448 ntBASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AL163642.2-201ENST00000604722 1019 ntBASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AC007423.1-201ENST00000605009 627 ntBASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AL732372.2-225ENST00000642124 456 ntBASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.34□□□□□ -1.87
RSPO3Q9BXY4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
RSPO3Q9BXY4 AL353746.1-201ENST00000566293 6881 ntBASIC3.34□□□□□ -1.88
RSPO3Q9BXY4 AC017002.4-201ENST00000604721 1525 ntBASIC3.34□□□□□ -1.88
RSPO3Q9BXY4 AC068647.1-201ENST00000489539 2265 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 SNORD3H-201ENST00000384486 214 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AL356806.1-201ENST00000422524 916 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AC017083.1-201ENST00000428093 483 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AC012497.1-201ENST00000429392 575 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AL365396.1-201ENST00000430854 671 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 RPL23AP83-201ENST00000434984 473 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 RPS29P7-201ENST00000439662 171 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 MTCO3P43-201ENST00000440974 771 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AC114878.1-201ENST00000441166 358 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 HMGN2P7-201ENST00000456186 273 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 PLGLA-201ENST00000465668 449 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AC011037.1-201ENST00000483964 558 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 DSTNP2-201ENST00000504533 515 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 SNORA70.18-201ENST00000516696 98 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 RNU1-45P-201ENST00000517191 141 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AC026333.2-201ENST00000542164 106 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AL049874.4-201ENST00000557593 255 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AL732618.1-201ENST00000623251 301 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 AP000553.6-201ENST00000641242 118 ntBASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RSPO3Q9BXY4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC007342.7-201ENST00000624610 2337 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 RNA5SP51-201ENST00000364750 119 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 SNORA40.4-201ENST00000390971 128 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC007066.1-201ENST00000392902 381 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AL136116.1-201ENST00000403591 381 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 TCEA1P4-201ENST00000415066 844 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 CRYBB2P1-203ENST00000415709 538 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 OSTCP5-201ENST00000425293 453 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC018644.1-201ENST00000429934 551 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 MTCO3P21-201ENST00000430791 643 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 RPL6P5-201ENST00000445678 828 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AL133547.1-201ENST00000448546 220 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 PRSS3P4-201ENST00000453323 162 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 AC099563.1-201ENST00000456086 418 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 snoU13.24-201ENST00000458998 104 ntBASIC3.32□□□□□ -1.88
RSPO3Q9BXY4 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms