Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AL078604.1-201ENST00000404609 466 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 GJA6P-201ENST00000415117 1042 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 RPS15AP10-201ENST00000432472 382 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 HMGB3P24-201ENST00000433260 622 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC005019.1-201ENST00000436455 431 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 FTH1P25-201ENST00000447665 469 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AP1S2P1-201ENST00000457344 379 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 RNU7-136P-201ENST00000458819 69 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC104849.1-201ENST00000462623 405 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 RPL7P43-201ENST00000478876 753 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC104687.1-201ENST00000485829 412 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 SNORA70.11-201ENST00000515987 138 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 SNORA70.13-201ENST00000516116 138 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 RNU6-714P-201ENST00000516963 103 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC107934.1-201ENST00000522215 217 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 HMGB3P26-201ENST00000560051 582 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 BNIP3P5-201ENST00000562290 498 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 MIR3672-201ENST00000584290 82 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AL354984.3-201ENST00000604803 325 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 IGHV3-29-201ENST00000604817 344 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC004792.1-201ENST00000614523 137 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC145207.9-201ENST00000623802 325 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AL353662.3-201ENST00000625131 237 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 AC079949.2-201ENST00000617117 2933 ntBASIC6.26□□□□□ -1.41
COL25A1Q9BXS0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AC011755.1-201ENST00000623763 2049 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 RNU6-1252P-201ENST00000363054 104 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 RN7SKP128-201ENST00000364270 303 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 RNVU1-6-201ENST00000364688 164 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 Y_RNA.478-201ENST00000384358 107 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AL606923.1-201ENST00000406616 190 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 NME1P1-201ENST00000420914 382 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 CHIAP3-201ENST00000423668 1133 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 RNU6-475P-201ENST00000516073 104 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 RN7SKP147-201ENST00000517154 244 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 IGHV3-76-201ENST00000522465 295 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 HMGN2P36-201ENST00000529541 409 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AP001858.2-201ENST00000536213 601 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AL031176.1-201ENST00000604554 466 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AC087783.2-201ENST00000605070 562 ntBASIC6.25□□□□□ -1.41
COL25A1Q9BXS0 AL391813.2-201ENST00000609113 322 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms