Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 HMGN2P7-201ENST00000456186 273 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 RNU6-1218P-201ENST00000458990 108 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 RN7SL481P-201ENST00000477764 299 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 CYB5AP5-201ENST00000549779 389 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC027104.1-201ENST00000563702 681 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 MIR4436B2-201ENST00000581415 91 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 MIR4436B1-201ENST00000583272 91 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC110743.1-201ENST00000584870 478 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AL121652.1-201ENST00000608851 448 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC093673.2-201ENST00000609674 331 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 SDR42E1P1-201ENST00000611327 477 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AL450489.1-201ENST00000612071 468 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC023043.4-201ENST00000612081 449 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC084824.4-201ENST00000620106 731 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 AC091953.3-201ENST00000623220 236 ntBASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC28BQ9BUN5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC106754.1-201ENST00000562632 1513 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AL353746.1-201ENST00000566293 6881 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC079741.1-201ENST00000321498 212 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 SNORD6-201ENST00000365444 73 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 RNU6-298P-201ENST00000390888 96 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 MTATP6P31-201ENST00000406985 692 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 RNU4-25P-201ENST00000410569 230 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 LIPT1P1-201ENST00000415870 1186 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 HSFY3P-201ENST00000444242 1191 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 RPS17P13-201ENST00000448974 407 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC008280.2-201ENST00000455473 307 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC104164.3-201ENST00000467363 1258 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC010627.1-201ENST00000503819 1294 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC111193.1-201ENST00000504097 155 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 IGKV2D-10-201ENST00000520194 281 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC025260.1-201ENST00000548858 430 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 TVP23BP1-201ENST00000557500 617 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 MTND1P8-201ENST00000571424 950 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 RN7SL622P-201ENST00000585292 275 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 PSMA6P4-201ENST00000603247 718 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC093765.1-201ENST00000603758 881 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC096586.1-201ENST00000610267 561 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AL161616.1-201ENST00000611867 286 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 MIR6729-201ENST00000618194 65 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AL121890.3-201ENST00000618494 516 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC022079.2-201ENST00000619739 566 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AL590396.4-201ENST00000636779 956 ntBASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CCDC28BQ9BUN5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 SEC63P2-201ENST00000503863 1939 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 RNU1-132P-201ENST00000364300 164 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 DNAJC19P6-201ENST00000401853 280 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 MTCO2P8-201ENST00000412213 658 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 OR5AW1P-201ENST00000426334 1006 ntBASIC3.84□□□□□ -1.79
CCDC28BQ9BUN5 AC114973.1-201ENST00000429057 632 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms