Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.35□□□□□ -1.87
LITAFQ99732 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.35□□□□□ -1.87
LITAFQ99732 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.35□□□□□ -1.87
LITAFQ99732 AC084757.1-201ENST00000559987 490 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AL133457.1-201ENST00000564251 987 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 TPRKBP2-201ENST00000565969 475 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC234778.2-201ENST00000566241 354 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.35□□□□□ -1.87
LITAFQ99732 LARP7P2-201ENST00000575306 125 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.35□□□□□ -1.87
LITAFQ99732 AP001180.3-201ENST00000582221 145 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 MIR4307-201ENST00000582802 84 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.35□□□□□ -1.87
LITAFQ99732 OR4G1P-201ENST00000588632 938 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.35□□□□□ -1.87
LITAFQ99732 BNIP3P8-201ENST00000597863 560 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC093765.1-201ENST00000603758 881 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC124916.2-201ENST00000604416 224 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC022001.1-201ENST00000605193 268 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 AC010857.1-201ENST00000606398 594 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.35□□□□□ -1.87
LITAFQ99732 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.35□□□□□ -1.87
LITAFQ99732 AC109347.2-201ENST00000610220 349 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC131902.3-201ENST00000611767 581 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AL355073.2-201ENST00000612106 557 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC091834.1-201ENST00000614543 472 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC123768.4-201ENST00000616244 701 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 HTR1DP1-201ENST00000616500 888 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.35□□□□□ -1.87
LITAFQ99732 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.35□□□□□ -1.87
LITAFQ99732 MIR6823-201ENST00000622118 61 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.35□□□□□ -1.87
LITAFQ99732 OR5AK4P-201ENST00000635912 903 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 5S_rRNA.29-201ENST00000641250 107 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LITAFQ99732 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
LITAFQ99732 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.35□□□□□ -1.87
LITAFQ99732 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AC006378.2-201ENST00000623178 2476 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 SCN1A-220ENST00000641603 12506 ntBASIC3.35□□□□□ -1.87
LITAFQ99732 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.35□□□□□ -1.87
LITAFQ99732 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.35□□□□□ -1.87
LITAFQ99732 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.35□□□□□ -1.87
LITAFQ99732 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LITAFQ99732 EOGT-210ENST00000615922 1931 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 AC015813.6-201ENST00000624409 5808 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LITAFQ99732 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
LITAFQ99732 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LITAFQ99732 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.34□□□□□ -1.87
LITAFQ99732 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.34□□□□□ -1.87
LITAFQ99732 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LITAFQ99732 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC3.34□□□□□ -1.87
LITAFQ99732 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
LITAFQ99732 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LITAFQ99732 AC092435.4-201ENST00000623012 4159 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.34□□□□□ -1.87
LITAFQ99732 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
LITAFQ99732 SNORA73.1-201ENST00000363107 205 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 RNU6-289P-201ENST00000364093 107 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 RN7SKP226-201ENST00000364912 300 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 RNU6-1283P-201ENST00000365314 105 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.34□□□□□ -1.87
LITAFQ99732 RNU6-1293P-201ENST00000384077 107 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 ARF4P3-201ENST00000397387 509 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 DHFRP6-201ENST00000401776 268 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 HMGB1P20-201ENST00000402555 677 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 AL133388.1-201ENST00000404509 287 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 RN7SKP266-201ENST00000410232 287 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.34□□□□□ -1.87
LITAFQ99732 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC3.34□□□□□ -1.87
LITAFQ99732 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.34□□□□□ -1.87
LITAFQ99732 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC3.34□□□□□ -1.87
LITAFQ99732 Z97055.1-201ENST00000419730 712 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC3.34□□□□□ -1.87
LITAFQ99732 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.34□□□□□ -1.87
LITAFQ99732 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.34□□□□□ -1.87
LITAFQ99732 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC3.34□□□□□ -1.87
LITAFQ99732 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.34□□□□□ -1.87
LITAFQ99732 AC109583.1-201ENST00000432156 268 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC3.34□□□□□ -1.87
LITAFQ99732 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.34□□□□□ -1.87
LITAFQ99732 MTATP6P23-201ENST00000440153 476 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 MTND5P14-201ENST00000441481 1267 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.34□□□□□ -1.87
LITAFQ99732 AC105399.1-202ENST00000447303 205 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.34□□□□□ -1.87
LITAFQ99732 ARPC3P5-201ENST00000448802 534 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.34□□□□□ -1.87
LITAFQ99732 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.34□□□□□ -1.87
LITAFQ99732 AC098824.1-201ENST00000453565 980 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 snoU109.1-201ENST00000459339 135 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 AC026410.2-201ENST00000460281 156 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 RN7SL517P-201ENST00000462240 305 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 AC090142.1-201ENST00000465776 462 ntBASIC3.34□□□□□ -1.87
LITAFQ99732 RPL7P22-201ENST00000466005 733 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms