Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 SAGE4P-201ENST00000442271 3381 ntBASIC5.42□□□□□ -1.54
IFT140Q96RY7 OR56A5-201ENST00000340110 738 ntBASIC5.42□□□□□ -1.54
IFT140Q96RY7 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.42□□□□□ -1.54
IFT140Q96RY7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.42□□□□□ -1.54
IFT140Q96RY7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.42□□□□□ -1.54
IFT140Q96RY7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.42□□□□□ -1.54
IFT140Q96RY7 AC067852.4-201ENST00000590314 478 ntBASIC5.42□□□□□ -1.54
IFT140Q96RY7 RPL23AP92-201ENST00000603609 255 ntBASIC5.42□□□□□ -1.54
IFT140Q96RY7 AL096803.3-201ENST00000609032 532 ntBASIC5.42□□□□□ -1.54
IFT140Q96RY7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
IFT140Q96RY7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.41□□□□□ -1.54
IFT140Q96RY7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
IFT140Q96RY7 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
IFT140Q96RY7 RNA5SP184-201ENST00000411071 108 ntBASIC5.41□□□□□ -1.54
IFT140Q96RY7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.41□□□□□ -1.54
IFT140Q96RY7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.41□□□□□ -1.54
IFT140Q96RY7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.41□□□□□ -1.54
IFT140Q96RY7 DPRXP4-201ENST00000578053 568 ntBASIC5.41□□□□□ -1.54
IFT140Q96RY7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC5.41□□□□□ -1.54
IFT140Q96RY7 ATP1B3P1-201ENST00000605365 821 ntBASIC5.41□□□□□ -1.54
IFT140Q96RY7 AC022149.2-201ENST00000621061 203 ntBASIC5.41□□□□□ -1.54
IFT140Q96RY7 AL356321.1-201ENST00000621360 228 ntBASIC5.41□□□□□ -1.54
IFT140Q96RY7 AC139713.2-210ENST00000641741 992 ntBASIC5.41□□□□□ -1.54
IFT140Q96RY7 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
IFT140Q96RY7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
IFT140Q96RY7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
IFT140Q96RY7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
IFT140Q96RY7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
IFT140Q96RY7 EEF1A1P41-201ENST00000414667 207 ntBASIC5.4□□□□□ -1.54
IFT140Q96RY7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.4□□□□□ -1.54
IFT140Q96RY7 AC004552.1-201ENST00000419089 348 ntBASIC5.4□□□□□ -1.54
IFT140Q96RY7 Z93242.1-201ENST00000427102 353 ntBASIC5.4□□□□□ -1.54
IFT140Q96RY7 AC093156.1-201ENST00000440382 670 ntBASIC5.4□□□□□ -1.54
IFT140Q96RY7 NPM1P29-201ENST00000483112 803 ntBASIC5.4□□□□□ -1.54
IFT140Q96RY7 AL359535.1-201ENST00000612100 1087 ntBASIC5.4□□□□□ -1.54
IFT140Q96RY7 AL158062.1-201ENST00000619632 745 ntBASIC5.4□□□□□ -1.54
IFT140Q96RY7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
IFT140Q96RY7 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.4□□□□□ -1.55
IFT140Q96RY7 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.4□□□□□ -1.55
IFT140Q96RY7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
IFT140Q96RY7 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
IFT140Q96RY7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.4□□□□□ -1.55
IFT140Q96RY7 AL132656.3-201ENST00000606384 1595 ntBASIC5.4□□□□□ -1.55
IFT140Q96RY7 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
IFT140Q96RY7 RNA5SP52-201ENST00000362448 134 ntBASIC5.39□□□□□ -1.55
IFT140Q96RY7 BTF3P9-201ENST00000418784 283 ntBASIC5.39□□□□□ -1.55
IFT140Q96RY7 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.39□□□□□ -1.55
IFT140Q96RY7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.39□□□□□ -1.55
IFT140Q96RY7 RN7SKP132-201ENST00000516001 208 ntBASIC5.39□□□□□ -1.55
IFT140Q96RY7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.39□□□□□ -1.55
IFT140Q96RY7 AC091544.4-201ENST00000555268 342 ntBASIC5.39□□□□□ -1.55
IFT140Q96RY7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC5.39□□□□□ -1.55
IFT140Q96RY7 AL162574.2-201ENST00000614618 657 ntBASIC5.39□□□□□ -1.55
IFT140Q96RY7 IGHVIII-44-202ENST00000636235 289 ntBASIC5.39□□□□□ -1.55
IFT140Q96RY7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
IFT140Q96RY7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
IFT140Q96RY7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
IFT140Q96RY7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
IFT140Q96RY7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
IFT140Q96RY7 BCLAF1P1-201ENST00000505813 2752 ntBASIC5.39□□□□□ -1.55
IFT140Q96RY7 RPS4XP8-201ENST00000402039 771 ntBASIC5.39□□□□□ -1.55
IFT140Q96RY7 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.39□□□□□ -1.55
IFT140Q96RY7 AL109933.2-201ENST00000452651 260 ntBASIC5.39□□□□□ -1.55
IFT140Q96RY7 AC068724.1-201ENST00000487100 792 ntBASIC5.39□□□□□ -1.55
IFT140Q96RY7 IGHV3-63-201ENST00000518422 341 ntBASIC5.39□□□□□ -1.55
IFT140Q96RY7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
IFT140Q96RY7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC5.39□□□□□ -1.55
IFT140Q96RY7 AC010149.2-201ENST00000637608 315 ntBASIC5.39□□□□□ -1.55
IFT140Q96RY7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
IFT140Q96RY7 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
IFT140Q96RY7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
IFT140Q96RY7 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.38□□□□□ -1.55
IFT140Q96RY7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
IFT140Q96RY7 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.38□□□□□ -1.55
IFT140Q96RY7 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
IFT140Q96RY7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
IFT140Q96RY7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
IFT140Q96RY7 RN7SKP220-201ENST00000410611 288 ntBASIC5.38□□□□□ -1.55
IFT140Q96RY7 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.38□□□□□ -1.55
IFT140Q96RY7 AC006989.1-201ENST00000427212 131 ntBASIC5.38□□□□□ -1.55
IFT140Q96RY7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.38□□□□□ -1.55
IFT140Q96RY7 AC074367.1-201ENST00000438685 1125 ntBASIC5.38□□□□□ -1.55
IFT140Q96RY7 AC108938.1-201ENST00000451204 136 ntBASIC5.38□□□□□ -1.55
IFT140Q96RY7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC5.38□□□□□ -1.55
IFT140Q96RY7 Y_RNA.638-201ENST00000459374 113 ntBASIC5.38□□□□□ -1.55
IFT140Q96RY7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
IFT140Q96RY7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.38□□□□□ -1.55
IFT140Q96RY7 AL390334.1-201ENST00000556395 450 ntBASIC5.38□□□□□ -1.55
IFT140Q96RY7 AL360157.1-201ENST00000565962 87 ntBASIC5.38□□□□□ -1.55
IFT140Q96RY7 AL353600.1-201ENST00000608148 251 ntBASIC5.38□□□□□ -1.55
IFT140Q96RY7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
IFT140Q96RY7 AL031595.2-201ENST00000624215 19071 ntBASIC5.38□□□□□ -1.55
IFT140Q96RY7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
IFT140Q96RY7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
IFT140Q96RY7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
IFT140Q96RY7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.37□□□□□ -1.55
IFT140Q96RY7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.37□□□□□ -1.55
IFT140Q96RY7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
IFT140Q96RY7 RPL6P21-201ENST00000418672 846 ntBASIC5.37□□□□□ -1.55
IFT140Q96RY7 AC092447.2-201ENST00000435487 669 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms