Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 U3.32-201ENST00000408116 212 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX18Q96RF0 RPL21P108-201ENST00000413857 481 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC233981.1-201ENST00000423224 461 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC093698.1-201ENST00000423843 571 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 PABPC1P9-201ENST00000426076 1612 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNX18Q96RF0 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC241584.1-201ENST00000438469 1241 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 RPL7AP61-201ENST00000443410 636 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 COX6CP12-201ENST00000446748 202 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 RPS15AP1-201ENST00000457423 391 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC091180.1-201ENST00000462104 372 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 RPL30P9-201ENST00000465586 330 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 RN7SL222P-201ENST00000476452 299 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 RPSAP50-201ENST00000481955 852 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC020890.1-201ENST00000491837 504 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 CDC42P4-201ENST00000510507 563 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC011352.1-201ENST00000512300 793 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 MTCYBP43-201ENST00000513621 740 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC134698.4-201ENST00000523451 826 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 OR5BR1P-201ENST00000524992 1330 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 HMGN2P6-201ENST00000551091 273 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC245505.1-201ENST00000556398 224 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 MIR4801-201ENST00000582704 82 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC020914.6-201ENST00000594327 272 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC069307.1-201ENST00000602820 447 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AP005432.2-201ENST00000608162 586 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC092794.1-201ENST00000612734 582 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AL121873.1-201ENST00000616013 524 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC012414.7-202ENST00000622705 1090 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 AC120349.2-201ENST00000625002 298 ntBASIC4.59□□□□□ -1.67
SNX18Q96RF0 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX18Q96RF0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
SNX18Q96RF0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SNX18Q96RF0 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
SNX18Q96RF0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
SNX18Q96RF0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
SNX18Q96RF0 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SNX18Q96RF0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC025125.1-201ENST00000624743 1922 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX18Q96RF0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX18Q96RF0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNX18Q96RF0 CR383658.2-201ENST00000547576 1525 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC005832.2-201ENST00000538921 1430 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX18Q96RF0 OR52B1P-201ENST00000316506 909 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 SNORA75-201ENST00000384158 137 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 Y_RNA.516-201ENST00000384541 124 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC007066.1-201ENST00000392902 381 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 RN7SKP213-201ENST00000410746 298 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 RPL23AP27-201ENST00000415161 451 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 NPM1P24-201ENST00000428039 894 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 RPL37P1-201ENST00000432310 284 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 B3GNT2P1-201ENST00000434960 952 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 OR52B5P-201ENST00000435337 951 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 AL357520.1-201ENST00000441557 453 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 BMI1P1-201ENST00000445879 941 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 SBDSP1-204ENST00000453858 737 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 TPT1P7-201ENST00000458300 517 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 RN7SL826P-201ENST00000479724 288 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 RN7SL808P-201ENST00000496066 299 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC108078.3-201ENST00000502633 489 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 NDUFA5P12-201ENST00000503796 343 ntBASIC4.58□□□□□ -1.68
SNX18Q96RF0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX18Q96RF0 RNU6-488P-201ENST00000515918 99 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms