Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 AC017083.1-201ENST00000428093 483 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 AC093422.3-201ENST00000428506 305 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 GSTA7P-201ENST00000438425 448 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS35Q96QK1 AL035407.2-201ENST00000454090 378 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS35Q96QK1 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS35Q96QK1 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS35Q96QK1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS35Q96QK1 FTH1P9-201ENST00000513251 355 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 RNA5SP179-201ENST00000517284 121 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS35Q96QK1 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS35Q96QK1 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS35Q96QK1 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS35Q96QK1 MIR4286-201ENST00000580651 93 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS35Q96QK1 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS35Q96QK1 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS35Q96QK1 AL592436.1-201ENST00000605135 558 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 AP003117.2-201ENST00000606010 545 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 AC113194.1-201ENST00000606037 500 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 AL162574.2-201ENST00000614618 657 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 AL391261.4-201ENST00000616012 481 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 AL139089.1-201ENST00000620372 975 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 MIR6500-201ENST00000622700 86 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS35Q96QK1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VPS35Q96QK1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS35Q96QK1 SEC63P2-201ENST00000503863 1939 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VPS35Q96QK1 AC024341.1-201ENST00000526444 1552 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 DCAF13P3-201ENST00000561147 1334 ntBASIC3.93□□□□□ -1.78
VPS35Q96QK1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS35Q96QK1 AC066616.2-201ENST00000559334 1481 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AP001486.2-201ENST00000561652 5113 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS35Q96QK1 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS35Q96QK1 FABP12P1-201ENST00000401911 322 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 RHEBP3-201ENST00000411920 351 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS35Q96QK1 AC073310.1-201ENST00000423226 1033 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 NPM1P34-201ENST00000428821 893 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 HMGB1P37-201ENST00000439613 609 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AC092809.1-201ENST00000441469 474 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 HMGB1P48-201ENST00000446155 598 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 MRPL35P4-201ENST00000453682 566 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 RPL31P61-201ENST00000496160 376 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 AC010460.1-201ENST00000507087 466 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 NDUFA5P2-201ENST00000519723 344 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AC087369.1-201ENST00000520775 996 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 OR4C2P-201ENST00000530855 1064 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 GNRHR2P1-201ENST00000555315 631 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 AGGF1P6-201ENST00000569213 976 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AC053481.4-201ENST00000583164 216 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AC115621.1-201ENST00000604653 858 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AC091167.4-201ENST00000605079 184 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AL034351.1-201ENST00000605288 668 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AP000255.1-201ENST00000610276 676 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 MIR6864-201ENST00000617935 70 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 AC073569.3-201ENST00000619055 682 ntBASIC3.92□□□□□ -1.78
VPS35Q96QK1 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
VPS35Q96QK1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS35Q96QK1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS35Q96QK1 TNPO1P3-201ENST00000436471 2662 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS35Q96QK1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 RNU6-1293P-201ENST00000384077 107 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 SNORA57.1-201ENST00000391227 145 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 AL158050.1-201ENST00000416077 457 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 AL390879.2-203ENST00000426943 1121 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 MTATP6P11-201ENST00000428071 670 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 RPL37P1-201ENST00000432310 284 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 AL512661.1-201ENST00000434586 1253 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 VN1R25P-201ENST00000443385 738 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS35Q96QK1 ANP32BP2-201ENST00000454525 545 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 VN1R40P-201ENST00000455196 941 ntBASIC3.91□□□□□ -1.78
VPS35Q96QK1 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms