Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 RAC1P2-201ENST00000511164 579 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 RNU6-1231P-201ENST00000517185 103 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 AC008802.1-201ENST00000519121 791 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 OR4C2P-201ENST00000530855 1064 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 AL161713.1-201ENST00000555538 145 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 CYP2C60P-201ENST00000566088 139 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 AP004607.9-201ENST00000618202 316 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 FP236240.3-201ENST00000623061 327 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 AC104820.1-201ENST00000624183 307 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 AC090229.1-201ENST00000590983 1609 ntBASIC3.54□□□□□ -1.84
COL21A1Q96P44 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL21A1Q96P44 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL21A1Q96P44 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
COL21A1Q96P44 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL21A1Q96P44 GTF2H2B-203ENST00000508065 1432 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL21A1Q96P44 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL21A1Q96P44 RAD1P1-201ENST00000231383 813 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 RN7SKP280-201ENST00000364196 304 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 U1.1-201ENST00000384101 164 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL21A1Q96P44 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 TCEA1P4-201ENST00000415066 844 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 RSL24D1P2-201ENST00000445584 366 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 RPS29P31-201ENST00000446147 164 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 GAPDHP36-201ENST00000480688 918 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 AC108941.1-201ENST00000502853 530 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 NPM1P41-201ENST00000512920 831 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL21A1Q96P44 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 AC022695.1-201ENST00000522089 237 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 MIR5685-201ENST00000579080 79 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 AL354760.1-201ENST00000608357 643 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 AC005344.1-201ENST00000613391 459 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL21A1Q96P44 AL353743.4-201ENST00000422653 1547 ntBASIC3.53□□□□□ -1.84
COL21A1Q96P44 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL21A1Q96P44 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.53□□□□□ -1.84
COL21A1Q96P44 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL21A1Q96P44 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL21A1Q96P44 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
COL21A1Q96P44 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
COL21A1Q96P44 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.53□□□□□ -1.85
COL21A1Q96P44 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL21A1Q96P44 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.52□□□□□ -1.85
COL21A1Q96P44 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL21A1Q96P44 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL21A1Q96P44 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL21A1Q96P44 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL21A1Q96P44 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.52□□□□□ -1.85
COL21A1Q96P44 MIR30B-201ENST00000384850 88 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 AC114814.2-201ENST00000419195 485 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 AL031736.2-201ENST00000426573 787 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 HIGD1AP12-201ENST00000427832 281 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 FTH1P6-201ENST00000430768 320 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 MTND2P21-201ENST00000436242 1042 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 SNORA71B-202ENST00000439232 272 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.52□□□□□ -1.85
COL21A1Q96P44 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL21A1Q96P44 AC114878.1-201ENST00000441166 358 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.52□□□□□ -1.85
COL21A1Q96P44 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.52□□□□□ -1.85
COL21A1Q96P44 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.52□□□□□ -1.85
COL21A1Q96P44 ANP32BP2-201ENST00000454525 545 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 RPL37P3-201ENST00000456825 293 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 SNORA84-201ENST00000459229 133 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 OR9N1P-202ENST00000494289 481 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.52□□□□□ -1.85
COL21A1Q96P44 RPL7P47-201ENST00000497299 556 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 HMGB1P21-201ENST00000502313 581 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.52□□□□□ -1.85
COL21A1Q96P44 FTH1P9-201ENST00000513251 355 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 RN7SKP141-201ENST00000516167 338 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 RNU6-751P-201ENST00000516382 101 ntBASIC3.52□□□□□ -1.85
COL21A1Q96P44 RNU6-352P-201ENST00000516908 107 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms