Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LRCH3Q96II8 RN7SKP160-201ENST00000363804 340 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 RNA5SP219-201ENST00000390940 113 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 RNU6-493P-201ENST00000391321 108 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 AP000580.1-201ENST00000404439 358 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 AL929472.1-201ENST00000417484 429 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LRCH3Q96II8 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 MYL8P-204ENST00000431574 518 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 AC010881.1-201ENST00000433830 235 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 AC094019.1-201ENST00000434678 472 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 CHEK2P4-201ENST00000450340 246 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 PPIAP7-201ENST00000454070 489 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 AC079804.1-201ENST00000461922 436 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 MRE11P1-201ENST00000464884 2127 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 AC104472.2-201ENST00000469035 601 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 TXNP6-201ENST00000510190 310 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 EIF3KP3-201ENST00000514461 639 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 RNA5SP438-201ENST00000516561 112 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 SNORA40.15-201ENST00000516884 107 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 AP000620.1-201ENST00000527147 504 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 OR4H6P-201ENST00000563771 921 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
LRCH3Q96II8 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
LRCH3Q96II8 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 AC092821.2-201ENST00000545710 2042 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
LRCH3Q96II8 AC132219.2-201ENST00000624416 2327 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 AL136984.1-201ENST00000607611 1893 ntBASIC7.11□□□□□ -1.27
LRCH3Q96II8 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.11□□□□□ -1.27
LRCH3Q96II8 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 NBPF8-201ENST00000583271 5330 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
LRCH3Q96II8 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LRCH3Q96II8 AC104162.1-201ENST00000430831 2382 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 PARP4P1-201ENST00000435945 2337 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LRCH3Q96II8 AL121886.1-201ENST00000358609 435 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 Y_RNA.2-201ENST00000362330 96 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 RNA5SP110-201ENST00000362638 115 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 U3.7-201ENST00000363668 216 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 U3.11-201ENST00000364476 212 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 Y_RNA.314-201ENST00000365114 102 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 U3.43-201ENST00000410734 213 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 RPL21P24-201ENST00000413752 448 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 Z99755.1-201ENST00000414048 380 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 AC108032.1-201ENST00000416706 207 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 AL353662.1-201ENST00000439099 327 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 DEFB109F-201ENST00000491870 277 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 RPS10P20-201ENST00000494130 463 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 AC055733.3-201ENST00000505214 523 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 SNORA40.14-201ENST00000516543 86 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 RNU6-307P-201ENST00000516743 106 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 AC007956.1-201ENST00000555623 542 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 RPL21P7-201ENST00000557463 483 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 AC015720.2-201ENST00000567709 334 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LRCH3Q96II8 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 MIR7973-1-201ENST00000614683 76 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LRCH3Q96II8 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LRCH3Q96II8 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LRCH3Q96II8 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LRCH3Q96II8 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
LRCH3Q96II8 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
LRCH3Q96II8 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LRCH3Q96II8 AC083806.2-201ENST00000617795 2685 ntBASIC7.1□□□□□ -1.27
LRCH3Q96II8 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LRCH3Q96II8 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
LRCH3Q96II8 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LRCH3Q96II8 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.09□□□□□ -1.27
LRCH3Q96II8 ZNF72P-201ENST00000425869 1908 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 HSPA8P18-201ENST00000439846 1928 ntBASIC7.09□□□□□ -1.27
LRCH3Q96II8 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms