Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC053481.2-202ENST00000582394 1500 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 RNU6-224P-201ENST00000384055 107 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 EIF5P1-201ENST00000400019 1231 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AL023807.1-201ENST00000407932 359 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 RBMY2KP-201ENST00000418221 992 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 RPF2P1-201ENST00000424137 906 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 CNOT7P1-201ENST00000429006 852 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 MTCO1P54-201ENST00000430139 712 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 GTF2IP3-201ENST00000433887 494 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC008072.1-201ENST00000434254 824 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC004022.1-201ENST00000447766 1066 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC104073.1-201ENST00000451988 151 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC091685.2-201ENST00000454924 864 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 RPS3AP41-201ENST00000462701 778 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 RPL12P20-201ENST00000475538 479 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC011005.3-201ENST00000491624 395 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 KLRA1P-201ENST00000503499 986 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC119751.4-201ENST00000507498 357 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 SULT1C2P1-202ENST00000562418 459 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 MIR5708-201ENST00000579723 85 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 OR7E18P-201ENST00000592589 702 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC096947.1-201ENST00000603233 470 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AL445435.1-201ENST00000604232 665 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC005084.1-201ENST00000605160 304 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 MIR432-201ENST00000606207 94 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC004825.2-201ENST00000616634 455 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AC090510.2-201ENST00000617465 629 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 C2orf27A-204ENST00000623058 969 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 AL445984.1-201ENST00000637834 659 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 MFSD8-242ENST00000641690 4199 ntBASIC4.17□□□□□ -1.74
VPS33AQ96AX1 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS33AQ96AX1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 ZNF37BP-203ENST00000452306 1352 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 RNA5SP388-201ENST00000362584 119 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 SUGT1P1-201ENST00000379514 476 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AL645927.1-201ENST00000396783 406 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 BOLA3P4-201ENST00000418151 400 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AC092634.6-201ENST00000418558 192 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 ELOCP8-201ENST00000439309 332 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 ELOCP15-201ENST00000442090 332 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 RPS3AP53-201ENST00000454716 778 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AC096571.1-202ENST00000506634 735 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 OR5M14P-201ENST00000506803 618 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AC017037.1-201ENST00000508460 471 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AL592156.1-201ENST00000508758 304 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AP001781.1-201ENST00000530977 207 ntBASIC4.16□□□□□ -1.74
VPS33AQ96AX1 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms