Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC110743.1-201ENST00000584870 478 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 AC115085.1-201ENST00000588924 229 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 AC234771.5-201ENST00000600161 514 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 MTND3P19-201ENST00000603825 345 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 AL354984.3-201ENST00000604803 325 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 AC090948.2-201ENST00000607363 564 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 AC100847.1-201ENST00000611316 481 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 AL355493.4-201ENST00000618530 292 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 AC233309.1-201ENST00000619522 751 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 MIR7702-201ENST00000621931 59 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 MIR4727-201ENST00000622232 55 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 AL157770.1-201ENST00000623049 439 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 AP002791.1-201ENST00000623291 381 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 AL049536.1-201ENST00000625043 744 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 AC092162.3-201ENST00000624511 1624 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 MFSD8-216ENST00000641147 4009 ntBASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.3□□□□□ -1.72
SLC44A1Q8WWI5 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 RNA5SP175-201ENST00000364275 119 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 RNU6-707P-201ENST00000364647 95 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 RNU6-413P-201ENST00000384115 107 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 JKAMPP1-201ENST00000413804 919 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC119751.6-201ENST00000416712 186 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 ELOCP9-201ENST00000418624 239 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC005005.2-201ENST00000420779 380 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 GTF2IP7-202ENST00000436677 309 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC233982.1-201ENST00000451247 436 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC009220.1-201ENST00000451614 275 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 RAD23BP3-201ENST00000454157 1152 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC092747.2-201ENST00000545069 983 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC090888.2-201ENST00000559765 1144 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AP001269.3-201ENST00000588718 329 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 ELOCP35-201ENST00000604289 336 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC115286.1-201ENST00000604298 434 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AL392112.1-201ENST00000605115 829 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC007349.4-201ENST00000608114 532 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AP004247.3-201ENST00000608682 624 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 CR392039.4-201ENST00000624968 501 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 ZNF663P-202ENST00000641770 1131 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AL049737.1-201ENST00000413920 1403 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 AC134882.1-201ENST00000603738 1676 ntBASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A1Q8WWI5 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 snoZ40.1-201ENST00000364540 72 ntBASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
SLC44A1Q8WWI5 MTND4P13-201ENST00000402078 1023 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms