Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AC114546.3-201ENST00000623582 1734 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AC021146.4-201ENST00000309229 279 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AC011155.1-201ENST00000316512 456 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 Y_RNA.25-201ENST00000362528 102 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AL590762.2-201ENST00000395798 571 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 COX5BP7-201ENST00000414780 274 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 TMBIM7P-201ENST00000418074 855 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 USP9YP26-201ENST00000421008 661 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 MTND4P20-201ENST00000424125 869 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 RPL31P54-201ENST00000429803 370 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AC105402.2-201ENST00000438503 358 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 MTCYBP3-201ENST00000445588 1137 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AL356981.1-201ENST00000454879 684 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AC021660.1-201ENST00000465006 554 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AC090142.1-201ENST00000465776 462 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 RPL7P38-201ENST00000488396 739 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 KLRA1P-201ENST00000503499 986 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 Y_RNA.688-201ENST00000516565 95 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 MIR1254-2-201ENST00000579553 63 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AC006272.2-201ENST00000594725 163 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AL109653.1-201ENST00000603091 248 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AC115286.1-201ENST00000604298 434 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 VIS1.1-201ENST00000610517 203 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 MIR6864-201ENST00000617935 70 ntBASIC4.67□□□□□ -1.66
HMGB4Q8WW32 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HMGB4Q8WW32 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 MTND4P34-201ENST00000572715 1371 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC100778.3-201ENST00000580060 1750 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 OR4A15-201ENST00000314706 1035 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 MIR506-201ENST00000384998 124 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AL590084.2-201ENST00000401481 382 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC009518.2-201ENST00000418056 731 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AL356387.2-201ENST00000422272 243 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AL365203.2-201ENST00000423444 196 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 RPL36P19-201ENST00000430744 301 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 GTF3AP5-201ENST00000442645 697 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 RSL24D1P3-201ENST00000449255 495 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 LINC00888-204ENST00000487386 421 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 FTH1P11-201ENST00000517577 551 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 MTCO1P47-201ENST00000523889 1271 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 CYCSP28-201ENST00000534284 321 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 UBE2NP1-201ENST00000545592 458 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC074029.1-201ENST00000552531 1044 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC040958.1-201ENST00000561102 201 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC011477.5-201ENST00000586571 259 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC006363.1-201ENST00000603806 463 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC114878.2-201ENST00000604863 1251 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC010857.1-201ENST00000606398 594 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC090948.2-201ENST00000607363 564 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC097505.1-201ENST00000610199 565 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 AC093783.1-201ENST00000612976 329 ntBASIC4.66□□□□□ -1.66
HMGB4Q8WW32 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms