Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC9.78□□□□□ -0.84
TRIM41Q8WV44 AC009027.1-201ENST00000604510 479 ntBASIC9.78□□□□□ -0.84
TRIM41Q8WV44 AC063952.1-203ENST00000634410 658 ntBASIC9.78□□□□□ -0.84
TRIM41Q8WV44 AC119674.1-212ENST00000641155 993 ntBASIC9.78□□□□□ -0.84
TRIM41Q8WV44 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM41Q8WV44 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM41Q8WV44 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC9.78□□□□□ -0.84
TRIM41Q8WV44 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TRIM41Q8WV44 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
TRIM41Q8WV44 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
TRIM41Q8WV44 AP000473.2-201ENST00000602659 1537 ntBASIC9.77□□□□□ -0.84
TRIM41Q8WV44 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
TRIM41Q8WV44 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 IMMTP1-201ENST00000435590 2219 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 RNA5SP234-201ENST00000363916 119 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 RNU6-398P-201ENST00000384143 109 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 RNU6-74P-201ENST00000384235 107 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 RPL32P23-201ENST00000397237 405 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 RNU2-39P-201ENST00000410604 198 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 RSL24D1P6-201ENST00000426934 401 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 RBMY2QP-201ENST00000429799 1147 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 AL606489.2-201ENST00000433886 234 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 AL138787.1-202ENST00000437804 898 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 AC092324.1-201ENST00000468671 324 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 AC098799.3-201ENST00000506095 438 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 AC112206.3-201ENST00000514578 389 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 SNORA48.10-201ENST00000516965 160 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 IGLVVI-25-1-201ENST00000521893 249 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 HMGB1P42-201ENST00000532126 553 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 MIR3124-201ENST00000582636 67 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 AP004247.3-201ENST00000608682 624 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 MRE11P1-201ENST00000464884 2127 ntBASIC9.77□□□□□ -0.85
TRIM41Q8WV44 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC9.77□□□□□ -0.85
TRIM41Q8WV44 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 CPS1-IT1-201ENST00000628368 2306 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 NACAP2-201ENST00000318548 624 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 Y_RNA.133-201ENST00000363428 110 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 RN7SKP227-201ENST00000364445 330 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 RNU6-639P-201ENST00000384074 107 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 RNU6-532P-201ENST00000384318 107 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 RNU6-331P-201ENST00000384724 107 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 RNU6-1105P-201ENST00000384774 107 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 AL450338.1-201ENST00000407987 512 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 MTND3P8-201ENST00000412909 339 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 ELOCP4-201ENST00000420090 333 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 RBM6-203ENST00000421682 684 ntTSL 2 BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 RPEP2-201ENST00000432149 701 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 BNIP3P2-201ENST00000441221 577 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 MRPS17P3-201ENST00000465453 385 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 AC027575.1-201ENST00000481064 460 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 RN7SKP21-201ENST00000516503 220 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 RNU6-264P-201ENST00000517134 104 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 AC021678.3-201ENST00000517893 476 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 MRPS16P1-201ENST00000523462 412 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 AC025574.1-201ENST00000554784 1653 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 AL122126.1-201ENST00000546905 1318 ntBASIC9.76□□□□□ -0.85
TRIM41Q8WV44 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
TRIM41Q8WV44 LARP1BP1-201ENST00000506036 1359 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms