Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ALMS1Q8TCU4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ALMS1Q8TCU4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC2.32□□□□□ -2.04
ALMS1Q8TCU4 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ALMS1Q8TCU4 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.32□□□□□ -2.04
ALMS1Q8TCU4 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 RPS4XP8-201ENST00000402039 771 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 OR6K4P-201ENST00000423179 955 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 OR5AW1P-201ENST00000426334 1006 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AL136360.1-201ENST00000503377 1900 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AC006504.1-201ENST00000562493 3666 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 MIR422A-201ENST00000362286 90 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 U3.19-201ENST00000390893 196 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AL691447.1-201ENST00000419456 387 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AL121890.1-201ENST00000435457 205 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 HLA-N-201ENST00000437516 135 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 SLC31A1P1-201ENST00000451221 567 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 Y_RNA.673-201ENST00000516306 88 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AC068020.1-201ENST00000594215 661 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AL034351.1-201ENST00000605288 668 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AC007656.2-201ENST00000624902 4547 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 UBE3AP2-201ENST00000429033 2259 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 RNU1-18P-201ENST00000363062 164 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AL138885.1-201ENST00000405921 675 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 MOB1AP1-201ENST00000430903 535 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AC239809.1-201ENST00000450470 217 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 DUXAP6-201ENST00000553858 601 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AC105227.2-201ENST00000615075 605 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 NPM1P13-201ENST00000452663 865 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 RN7SL585P-201ENST00000470538 280 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AC087276.1-201ENST00000529659 480 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 OR7A8P-201ENST00000595427 913 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 AC083843.2-201ENST00000568248 6253 ntBASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
ALMS1Q8TCU4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 OTUD4P1-201ENST00000237841 3067 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 RNA5SP322-201ENST00000363617 119 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 SNORA48.8-201ENST00000391324 134 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 RN7SKP111-201ENST00000410349 271 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AC109925.1-201ENST00000478069 331 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AC005242.1-201ENST00000585658 438 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AL451142.2-201ENST00000429076 2090 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AL031679.1-201ENST00000400616 525 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AL357075.1-201ENST00000404107 726 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 VN1R8P-201ENST00000407739 893 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AL513175.1-201ENST00000431492 780 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AC005002.1-201ENST00000447458 540 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 OR2A20P-203ENST00000498397 1268 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 HNRNPKP5-201ENST00000515300 253 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AL133457.1-201ENST00000564251 987 ntBASIC2.3□□□□□ -2.04
ALMS1Q8TCU4 AC025946.2-201ENST00000603398 234 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms