Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 AC092184.1-201ENST00000625042 715 ntBASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 MTND4P31-201ENST00000425607 1343 ntBASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CLHC1Q8NHS4 PRO1804-201ENST00000623780 2050 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 RNA5SP295-201ENST00000362655 121 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 SOD2P1-201ENST00000396543 562 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 HIGD1AP12-201ENST00000427832 281 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 AL117339.2-201ENST00000430475 180 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 SKP1P1-201ENST00000438081 489 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 AL662791.1-201ENST00000441992 928 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 AL627224.1-201ENST00000448334 444 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 RN7SL385P-201ENST00000468873 276 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 AC108941.1-201ENST00000502853 530 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 AC021087.2-201ENST00000504656 1203 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 AC008011.1-201ENST00000545989 227 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 AC010735.1-201ENST00000567305 1026 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 SNORA62.6-201ENST00000606322 83 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 AC006338.2-201ENST00000616864 791 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 AC090337.1-201ENST00000579651 2074 ntBASIC3.59□□□□□ -1.83
CLHC1Q8NHS4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLHC1Q8NHS4 AL049737.1-201ENST00000413920 1403 ntBASIC3.59□□□□□ -1.84
CLHC1Q8NHS4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.59□□□□□ -1.84
CLHC1Q8NHS4 AC021755.1-201ENST00000559747 1447 ntBASIC3.59□□□□□ -1.84
CLHC1Q8NHS4 AL353746.1-201ENST00000566293 6881 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 SNORA7.2-201ENST00000364446 145 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 RNU1-13P-201ENST00000384499 162 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 EIF5P1-201ENST00000400019 1231 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AL049693.1-201ENST00000402760 611 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 MTCO3P31-201ENST00000405526 789 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AC092017.2-201ENST00000427600 362 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 MOB1AP1-201ENST00000430903 535 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 OR4C10P-201ENST00000434991 931 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 HMGB1P12-201ENST00000438594 598 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 ELOCP3-201ENST00000439303 348 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 SLC31A1P1-201ENST00000451221 567 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 MTCO3P16-201ENST00000454456 754 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 CYCSP53-201ENST00000455540 265 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 OR9M1P-201ENST00000459641 921 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AC092754.2-201ENST00000463506 460 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AC021146.1-201ENST00000511202 716 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AL049870.4-201ENST00000555741 486 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 MIR3186-201ENST00000577404 85 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 ZNF92P3-201ENST00000596594 954 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AL133247.2-201ENST00000603236 482 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AL606490.9-201ENST00000603331 271 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AC005156.1-201ENST00000613371 573 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AL731566.2-201ENST00000618971 317 ntBASIC3.58□□□□□ -1.84
CLHC1Q8NHS4 AC244205.2-202ENST00000635781 342 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms