Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 Y_RNA.408-201ENST00000383987 102 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 GSTM3P2-201ENST00000412746 530 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 PDSS1P1-201ENST00000422953 1114 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC244035.1-201ENST00000430042 390 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AL513175.1-201ENST00000431492 780 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 RPS25P9-201ENST00000435591 252 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AL360221.1-201ENST00000445989 335 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 DDX39BP2-208ENST00000453923 258 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 MTCO3P16-201ENST00000454456 754 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 MTCO2P18-201ENST00000457151 658 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 ABCC13-202ENST00000463099 3842 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 UQCRHP4-201ENST00000471686 272 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 RPS6P4-201ENST00000494693 758 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC104685.1-201ENST00000502445 371 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC026726.1-201ENST00000512859 601 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC068714.1-201ENST00000559623 800 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC012435.1-202ENST00000568772 240 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC115085.1-201ENST00000588924 229 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC018714.1-201ENST00000605028 208 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC112220.3-201ENST00000605502 502 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC006270.3-201ENST00000605967 1036 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AL133243.1-201ENST00000614487 366 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC008083.4-201ENST00000615076 444 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC127502.3-201ENST00000636170 1206 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC104260.2-201ENST00000623551 3497 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC006210.2-201ENST00000367074 1545 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 AC107982.1-201ENST00000507171 1300 ntBASIC5.74□□□□□ -1.49
SMC1BQ8NDV3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 SNORA4.1-201ENST00000364263 144 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 RNU2-65P-201ENST00000410162 185 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 RNU6-920P-201ENST00000410926 92 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 TBCAP2-201ENST00000416175 326 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC004865.1-201ENST00000442276 1003 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 MTND2P19-201ENST00000449129 1012 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AL591363.1-201ENST00000450091 483 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AL354710.1-201ENST00000453641 246 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC079804.1-201ENST00000461922 436 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 RN7SL810P-201ENST00000493031 276 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AL160281.1-201ENST00000605307 311 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC243654.2-201ENST00000612843 443 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AL158063.1-201ENST00000615349 536 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC116563.2-201ENST00000624751 535 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 MKKS-204ENST00000639674 192 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 AC092162.3-201ENST00000624511 1624 ntBASIC5.73□□□□□ -1.49
SMC1BQ8NDV3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms