Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 AL391684.1-202ENST00000641293 1636 ntBASIC4.86□□□□□ -1.63
HERC6Q8IVU3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.86□□□□□ -1.63
HERC6Q8IVU3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 MIR217-201ENST00000384817 110 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 DSTNP4-201ENST00000399472 474 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 RNA5SP44-201ENST00000410446 133 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 EIF4HP2-201ENST00000424380 563 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AL117339.2-201ENST00000430475 180 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 IFNWP4-201ENST00000453148 294 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 RPS15AP1-201ENST00000457423 391 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AC090686.1-201ENST00000481577 749 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AC011037.1-201ENST00000483964 558 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AC110792.2-201ENST00000510278 224 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 RNA5SP143-201ENST00000516936 115 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AP001189.2-201ENST00000527320 189 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AC087477.6-201ENST00000559595 843 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AADACP1-206ENST00000561502 1193 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AC023813.2-201ENST00000564321 469 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AC074051.3-201ENST00000570238 358 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AC022662.1-201ENST00000580252 331 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AC140725.3-201ENST00000616193 880 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AL158163.2-201ENST00000619110 700 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AC112484.5-201ENST00000624189 228 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AC112200.1-201ENST00000625015 234 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 Z95327.2-201ENST00000414579 1873 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 AP001273.1-201ENST00000624493 3152 ntBASIC4.85□□□□□ -1.63
HERC6Q8IVU3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.85□□□□□ -1.63
HERC6Q8IVU3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 DDX18P3-201ENST00000404856 2007 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 ERCC6-202ENST00000374127 1782 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 AL445487.1-201ENST00000415694 1580 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 MTND4P8-201ENST00000514997 1362 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 MIR331-201ENST00000362302 94 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 RNU6-582P-201ENST00000362989 107 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 RNU4-28P-201ENST00000364739 141 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 SNORA70.4-201ENST00000365509 134 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 SNORD65.1-201ENST00000390889 71 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 ERHP2-201ENST00000402323 299 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 COX6CP15-201ENST00000426313 211 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 USP9YP31-201ENST00000431405 881 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 MTND6P18-201ENST00000439477 513 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 MRPL48P1-201ENST00000445390 636 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 AL358232.1-201ENST00000448030 501 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 HMGB3P21-201ENST00000452483 547 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 ARL4AP1-201ENST00000503220 705 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 KRT19P6-201ENST00000510983 209 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 AC093755.1-201ENST00000512950 1023 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 AC087808.1-201ENST00000520501 361 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 ARL2BPP5-201ENST00000523141 481 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 BNIP3P26-201ENST00000600827 554 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 AL353600.1-201ENST00000608148 251 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 DHX9P1-201ENST00000436565 3076 ntBASIC4.84□□□□□ -1.63
HERC6Q8IVU3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HERC6Q8IVU3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.84□□□□□ -1.64
HERC6Q8IVU3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HERC6Q8IVU3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.84□□□□□ -1.64
HERC6Q8IVU3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.84□□□□□ -1.64
HERC6Q8IVU3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.83□□□□□ -1.64
HERC6Q8IVU3 AL672167.1-205ENST00000641112 3080 ntBASIC4.83□□□□□ -1.64
HERC6Q8IVU3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms