Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MTATP6P31-201ENST00000406985 692 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 HMGB3P20-201ENST00000417997 600 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AL592293.2-201ENST00000422292 996 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 MORF4L1P7-201ENST00000426038 703 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AC073143.1-201ENST00000436316 395 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AL513321.1-201ENST00000441175 761 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AC006326.1-201ENST00000445465 787 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 HMGN2P21-201ENST00000447764 270 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AL136097.1-201ENST00000456945 913 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AC078817.1-201ENST00000492623 435 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AP001086.1-201ENST00000494882 321 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AC026784.1-201ENST00000507986 352 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 RNA5SP164-201ENST00000516533 110 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AC233266.2-201ENST00000567067 528 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 MIR4700-201ENST00000578311 74 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 MIR3138-201ENST00000585238 82 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 OR4H6P-202ENST00000603819 340 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AL450270.1-201ENST00000606160 391 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 AC105429.2-201ENST00000610567 517 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 PRO1804-201ENST00000623780 2050 ntBASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NUDCD3Q8IVD9 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 GABPAP-201ENST00000419271 1356 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 MTND4P21-201ENST00000453886 1357 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AL589826.1-201ENST00000340697 249 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AC136624.1-201ENST00000400791 413 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 MIR1303-201ENST00000408625 86 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 RN7SKP285-201ENST00000410137 318 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 RNU2-6P-201ENST00000411404 190 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 VTA1P1-201ENST00000414044 866 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 FAR1P1-201ENST00000427163 934 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 RPS20P32-201ENST00000456044 356 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AC099563.1-201ENST00000456086 418 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 HMGB3P30-201ENST00000457863 606 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AC007537.2-201ENST00000472093 511 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AC108729.2-201ENST00000476543 840 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 TRAV31-201ENST00000502780 342 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 PTP4A1P6-201ENST00000531034 478 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 MIR4284-201ENST00000578924 81 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AC007687.1-201ENST00000602704 304 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AL354696.1-201ENST00000614652 497 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 MIR1264-201ENST00000616374 69 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AC006065.5-201ENST00000623427 349 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 MIR7641-1-201ENST00000627518 61 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 SEPT7P7-201ENST00000420492 1301 ntBASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NUDCD3Q8IVD9 NMD3P1-201ENST00000439704 1488 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 HSPA8P19-201ENST00000505359 1517 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 RNU1-32P-201ENST00000363937 159 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 RNA5SP235-201ENST00000365411 114 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 RNA5SP167-201ENST00000365461 116 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 MIR153-1-201ENST00000384914 90 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 RPS26P8-201ENST00000393490 348 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AL136116.1-201ENST00000403591 381 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AL158071.1-201ENST00000430315 461 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 EIF2S2P2-201ENST00000447161 982 ntBASIC3.67□□□□□ -1.82
NUDCD3Q8IVD9 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms