Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 GTF2IP13-201ENST00000438487 386 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AL450996.1-201ENST00000445574 1202 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC104651.2-201ENST00000447549 528 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 TRBV26-201ENST00000456572 344 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC004129.2-201ENST00000457229 287 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 Y_RNA.639-201ENST00000458981 102 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AP000893.1-201ENST00000474462 794 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 RPL21P6-201ENST00000479171 504 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 RPL7AP10-201ENST00000481016 791 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 RPL23AP72-201ENST00000492447 435 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 RPS4XP14-201ENST00000493072 781 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC108693.1-201ENST00000496068 432 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 IGBP1P4-201ENST00000503202 879 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC093815.1-201ENST00000508637 280 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 Y_RNA.667-201ENST00000516212 107 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 SCARNA18.1-201ENST00000516330 83 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 BTF3P12-201ENST00000519620 469 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC005363.1-201ENST00000530779 351 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AL356432.3-201ENST00000568952 465 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AL499605.1-201ENST00000604628 403 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC243654.2-201ENST00000612843 443 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 PARP4P2-201ENST00000446672 3326 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC090229.1-201ENST00000590983 1609 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AC107081.3-201ENST00000612715 2034 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 KPNA2P2-201ENST00000419546 1489 ntBASIC5.58□□□□□ -1.52
UBE3DQ7Z6J8 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 RNU1-150P-201ENST00000362491 162 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 Y_RNA.145-201ENST00000363527 102 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 RNU1-85P-201ENST00000364127 164 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 RNA5SP394-201ENST00000364216 119 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 RNA5SP500-201ENST00000364486 119 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 RNU2-9P-201ENST00000410194 145 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 AC073136.2-201ENST00000417282 849 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 RPL37P1-201ENST00000432310 284 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 PPIAP13-201ENST00000434706 478 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 GAPDHP48-201ENST00000436626 961 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 AC096775.1-201ENST00000437724 448 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 HSPE1P28-201ENST00000443139 211 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 RPS26P56-201ENST00000444468 240 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 FRG2FP-204ENST00000453982 852 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 AC005229.2-201ENST00000456995 399 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 AC093166.4-201ENST00000457867 318 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 RNU6-329P-201ENST00000459618 107 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 HMGN2P26-201ENST00000463169 339 ntBASIC5.57□□□□□ -1.52
UBE3DQ7Z6J8 AC233702.1-201ENST00000482905 502 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms