Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RPL12P25-202ENST00000598100 674 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AL160237.3-201ENST00000604114 1013 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC115286.1-201ENST00000604298 434 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AL365400.2-201ENST00000605604 902 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC026790.2-201ENST00000606282 430 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AL583856.2-201ENST00000606298 543 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AP002360.3-201ENST00000607673 710 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC023043.4-201ENST00000612081 449 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 RAD17P1-201ENST00000418130 2042 ntBASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUP54Q7Z3B4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 SNORA7.2-201ENST00000364446 145 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 RNA5SP22-201ENST00000365393 109 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 MIR659-201ENST00000384963 97 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AL121972.1-201ENST00000402023 252 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 RNU2-37P-201ENST00000410695 177 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AL356387.2-201ENST00000422272 243 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 RPL7AP25-201ENST00000423357 805 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 RPEP3-201ENST00000425462 676 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 RPS27AP15-201ENST00000447672 466 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 VN1R32P-201ENST00000452234 905 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 RPL7AP28-201ENST00000464513 571 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC092451.1-201ENST00000480211 153 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 GAPDHP39-201ENST00000481866 979 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC113420.1-201ENST00000507903 571 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 RNU6-202P-201ENST00000515998 96 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC023632.1-201ENST00000518463 375 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 OR10V3P-201ENST00000525712 725 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 MIR4715-201ENST00000584117 79 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AL020997.3-201ENST00000602843 359 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC119501.1-201ENST00000603646 475 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC099676.1-201ENST00000608886 657 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC012531.5-201ENST00000611375 151 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AL133383.2-201ENST00000622958 2336 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 AL672167.1-203ENST00000641299 2975 ntBASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
NUP54Q7Z3B4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 RNA5SP151-201ENST00000365632 117 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC009480.2-201ENST00000422916 432 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 COX6CP15-201ENST00000426313 211 ntBASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.12□□□□□ -1.75
NUP54Q7Z3B4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms