Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AP000827.1-201ENST00000527814 258 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC006362.1-201ENST00000567392 174 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 RPL23AP97-201ENST00000568955 471 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 EIF1P4-201ENST00000572664 335 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC125494.3-201ENST00000602759 455 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 RBM11P1-201ENST00000604951 799 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AP002360.4-201ENST00000606980 481 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AP000238.1-201ENST00000608759 426 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC116651.1-201ENST00000609724 556 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC015540.1-201ENST00000615828 501 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC090246.1-201ENST00000616499 426 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC009878.1-201ENST00000621819 340 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC007546.2-201ENST00000623996 360 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 AC087359.1-201ENST00000508335 1740 ntBASIC4.41□□□□□ -1.7
ZNF549Q6P9A3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
ZNF549Q6P9A3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
ZNF549Q6P9A3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ZNF549Q6P9A3 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.4□□□□□ -1.7
ZNF549Q6P9A3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
ZNF549Q6P9A3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
ZNF549Q6P9A3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.4□□□□□ -1.7
ZNF549Q6P9A3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
ZNF549Q6P9A3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.7
ZNF549Q6P9A3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
ZNF549Q6P9A3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.7
ZNF549Q6P9A3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.4□□□□□ -1.7
ZNF549Q6P9A3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 ENSAP3-201ENST00000312710 333 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 RNU1-130P-201ENST00000363930 160 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 RNA5SP22-201ENST00000365393 109 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 MT-TH-201ENST00000387441 69 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 RNU6-575P-201ENST00000411326 105 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC013404.1-201ENST00000413068 249 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 VTA1P1-201ENST00000414044 866 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 ELOCP17-201ENST00000414751 326 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 RBMY2KP-201ENST00000418221 992 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC019050.1-201ENST00000418508 492 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AL139421.1-201ENST00000423010 169 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 OR6K4P-201ENST00000423179 955 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 RPL7AP25-201ENST00000423357 805 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AL031667.1-201ENST00000440222 725 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 MTND2P20-201ENST00000440805 661 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC011753.3-201ENST00000443436 406 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC005002.1-201ENST00000447458 540 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AL513533.1-201ENST00000453728 415 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 RPS27AP17-201ENST00000463344 455 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 LTV1P1-201ENST00000510683 1237 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AP000859.1-201ENST00000525536 307 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AP002963.1-201ENST00000530590 184 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC100770.1-201ENST00000532310 322 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC092747.2-201ENST00000545069 983 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC018714.1-201ENST00000605028 208 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AL139286.2-201ENST00000606838 396 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 Z98200.1-201ENST00000607298 470 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC019131.2-201ENST00000609071 870 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AL161616.1-201ENST00000611867 286 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC092794.1-201ENST00000612734 582 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC023509.5-201ENST00000617434 807 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC021106.3-201ENST00000623925 531 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 AC105074.1-201ENST00000623380 3095 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 SAMMSON-213ENST00000641336 1521 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 MFSD8-216ENST00000641147 4009 ntBASIC4.4□□□□□ -1.71
ZNF549Q6P9A3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms