Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AL354976.1-201ENST00000613843 387 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC234782.5-201ENST00000617723 324 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
SLC44A4Q53GD3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 USP9YP4-201ENST00000424401 1745 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AL391994.1-201ENST00000254724 282 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 RNU6-553P-201ENST00000364047 96 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 RN7SKP227-201ENST00000364445 330 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 RNU4-75P-201ENST00000364621 146 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 SNORA70F-201ENST00000384142 135 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 SNORA70.10-201ENST00000384515 134 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 RPS24P12-201ENST00000402084 394 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 RN7SKP16-201ENST00000410180 299 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 GSTM3P2-201ENST00000412746 530 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 CYCSP10-201ENST00000417973 294 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AC092634.6-201ENST00000418558 192 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 RPL17P36-201ENST00000420302 549 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AL022400.1-201ENST00000423946 935 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AL513175.1-201ENST00000431492 780 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 ISCA1P2-201ENST00000438679 421 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 ARL2BPP10-201ENST00000446487 531 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AC007537.2-201ENST00000472093 511 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 OR52A4P-201ENST00000472867 958 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 RN7SKP122-201ENST00000515923 296 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 RN7SKP46-201ENST00000515942 234 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 RNY4P37-201ENST00000516225 96 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 SNORA48.10-201ENST00000516965 160 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 TRAV15-201ENST00000556680 249 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AL592221.1-201ENST00000605266 382 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AC103591.3-201ENST00000608684 209 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AC097505.1-201ENST00000610199 565 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AL121890.2-201ENST00000617644 465 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AC243756.2-201ENST00000618406 463 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AC091931.1-201ENST00000623488 728 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 MKKS-204ENST00000639674 192 ntBASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SLC44A4Q53GD3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AL590240.1-201ENST00000334118 313 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 RNU6-931P-201ENST00000363850 107 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 Y_RNA.194-201ENST00000363985 102 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 SUGT1P1-201ENST00000379514 476 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AL049697.2-201ENST00000403708 294 ntBASIC5.05□□□□□ -1.6
SLC44A4Q53GD3 AC104333.2-201ENST00000422630 192 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms