Protein–RNA interactions for Protein: Q0VFZ6

CCDC173, Coiled-coil domain-containing protein 173, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC173Q0VFZ6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 ZNF826P-207ENST00000622273 1910 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 RNU6-805P-201ENST00000365643 106 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 EI24P2-201ENST00000397776 1076 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 RPL30P3-201ENST00000424262 333 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 RPL23AP83-201ENST00000434984 473 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AC074367.1-201ENST00000438685 1125 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 RPS27P29-201ENST00000463110 252 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 RN7SL330P-201ENST00000469709 307 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AC020893.1-201ENST00000502452 580 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 TRAV31-201ENST00000502780 342 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AC021146.5-201ENST00000503544 545 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 TXNP6-201ENST00000510190 310 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AC008958.1-201ENST00000511047 682 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 RN7SKP289-201ENST00000517244 295 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 OR4A2P-201ENST00000527276 913 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 OR4A12P-201ENST00000530847 918 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AC006518.1-201ENST00000541449 943 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AC008507.1-201ENST00000587506 734 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 AL161729.3-201ENST00000603533 673 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 LARP1BP1-201ENST00000506036 1359 ntBASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC173Q0VFZ6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 MIR200C-201ENST00000384980 68 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 MIR199A2-201ENST00000385289 110 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 SKINT1L-201ENST00000401057 817 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 RPS27AP11-201ENST00000402798 447 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 RN7SKP159-201ENST00000410657 292 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 RNA5SP31-201ENST00000411144 127 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 NDUFB1P1-201ENST00000435191 180 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 RPS29P7-201ENST00000439662 171 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 MTND3P4-201ENST00000453537 303 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 TVP23BP2-201ENST00000455082 615 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 AL049830.2-201ENST00000480072 201 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 SNX5P1-201ENST00000505757 1041 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 RAC1P2-201ENST00000511164 579 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 AC099522.1-202ENST00000514718 367 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 AC093331.1-201ENST00000521474 169 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 AC037471.2-201ENST00000564941 598 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 AP001180.3-201ENST00000582221 145 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 AC104820.1-201ENST00000624183 307 ntBASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC173Q0VFZ6 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.21□□□□□ -1.73
CCDC173Q0VFZ6 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.21□□□□□ -1.73
CCDC173Q0VFZ6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 SNORA71.3-201ENST00000362582 128 ntBASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 SNORA73.2-201ENST00000364946 201 ntBASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 MIR421-201ENST00000365696 85 ntBASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 RNU6-328P-201ENST00000390887 106 ntBASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 AL034374.1-201ENST00000406329 351 ntBASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 HSPE1P12-201ENST00000412576 301 ntBASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 AL049610.1-201ENST00000423374 372 ntBASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 OR5BE1P-201ENST00000425977 939 ntBASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 ARF4P2-201ENST00000430209 526 ntBASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 MTCO1P57-201ENST00000432182 261 ntBASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 ARL5AP3-201ENST00000439327 386 ntBASIC4.21□□□□□ -1.74
CCDC173Q0VFZ6 RPS3AP46-201ENST00000448352 682 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms