Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSBP1Q04837 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSBP1Q04837 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SSBP1Q04837 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.71□□□□□ -1.98
SSBP1Q04837 CR382285.2-201ENST00000624662 1495 ntBASIC2.71□□□□□ -1.98
SSBP1Q04837 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.7□□□□□ -1.98
SSBP1Q04837 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SSBP1Q04837 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SSBP1Q04837 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SSBP1Q04837 SNORD88.1-201ENST00000408684 91 ntBASIC2.7□□□□□ -1.98
SSBP1Q04837 AC007390.1-201ENST00000415722 356 ntBASIC2.7□□□□□ -1.98
SSBP1Q04837 SLC4A1APP1-201ENST00000419995 602 ntBASIC2.7□□□□□ -1.98
SSBP1Q04837 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC2.7□□□□□ -1.98
SSBP1Q04837 AL353705.1-201ENST00000433468 480 ntBASIC2.7□□□□□ -1.98
SSBP1Q04837 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.7□□□□□ -1.98
SSBP1Q04837 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.7□□□□□ -1.98
SSBP1Q04837 RBMY2UP-201ENST00000453474 324 ntBASIC2.7□□□□□ -1.98
SSBP1Q04837 RPL9P32-201ENST00000464118 620 ntBASIC2.7□□□□□ -1.98
SSBP1Q04837 RPL23AP11-201ENST00000475260 469 ntBASIC2.7□□□□□ -1.98
SSBP1Q04837 ACTR3P3-201ENST00000480448 893 ntBASIC2.7□□□□□ -1.98
SSBP1Q04837 AP004217.1-201ENST00000480579 346 ntBASIC2.7□□□□□ -1.98
SSBP1Q04837 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.7□□□□□ -1.98
SSBP1Q04837 AC108860.1-201ENST00000484521 383 ntBASIC2.7□□□□□ -1.98
SSBP1Q04837 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.7□□□□□ -1.98
SSBP1Q04837 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.7□□□□□ -1.98
SSBP1Q04837 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC2.7□□□□□ -1.98
SSBP1Q04837 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.7□□□□□ -1.98
SSBP1Q04837 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.7□□□□□ -1.98
SSBP1Q04837 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.7□□□□□ -1.98
SSBP1Q04837 RN7SL753P-201ENST00000581238 290 ntBASIC2.7□□□□□ -1.98
SSBP1Q04837 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.7□□□□□ -1.98
SSBP1Q04837 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.7□□□□□ -1.98
SSBP1Q04837 AL021707.7-201ENST00000607991 416 ntBASIC2.7□□□□□ -1.98
SSBP1Q04837 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.7□□□□□ -1.98
SSBP1Q04837 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.7□□□□□ -1.98
SSBP1Q04837 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC2.7□□□□□ -1.98
SSBP1Q04837 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.7□□□□□ -1.98
SSBP1Q04837 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.7□□□□□ -1.98
SSBP1Q04837 AF117829.1-206ENST00000621883 3802 ntBASIC2.7□□□□□ -1.98
SSBP1Q04837 MAPK10-362ENST00000641864 4484 ntBASIC2.69□□□□□ -1.98
SSBP1Q04837 AL365440.1-201ENST00000436135 2167 ntBASIC2.69□□□□□ -1.98
SSBP1Q04837 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SSBP1Q04837 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SSBP1Q04837 MIR372-201ENST00000362225 67 ntBASIC2.69□□□□□ -1.98
SSBP1Q04837 SNORA58B-201ENST00000364259 136 ntBASIC2.69□□□□□ -1.98
SSBP1Q04837 SNORA48.8-201ENST00000391324 134 ntBASIC2.69□□□□□ -1.98
SSBP1Q04837 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SSBP1Q04837 PPIAP31-201ENST00000405422 495 ntBASIC2.69□□□□□ -1.98
SSBP1Q04837 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.69□□□□□ -1.98
SSBP1Q04837 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SSBP1Q04837 TCEA1P4-201ENST00000415066 844 ntBASIC2.69□□□□□ -1.98
SSBP1Q04837 AL356806.1-201ENST00000422524 916 ntBASIC2.69□□□□□ -1.98
SSBP1Q04837 MTCO1P51-201ENST00000427672 1060 ntBASIC2.69□□□□□ -1.98
SSBP1Q04837 AL035458.1-201ENST00000433096 585 ntBASIC2.69□□□□□ -1.98
SSBP1Q04837 AL662791.1-201ENST00000441992 928 ntBASIC2.69□□□□□ -1.98
SSBP1Q04837 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC2.69□□□□□ -1.98
SSBP1Q04837 AL592437.1-201ENST00000443781 492 ntBASIC2.69□□□□□ -1.98
SSBP1Q04837 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.69□□□□□ -1.98
SSBP1Q04837 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.69□□□□□ -1.98
SSBP1Q04837 AC018635.1-201ENST00000468292 1030 ntBASIC2.69□□□□□ -1.98
SSBP1Q04837 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.69□□□□□ -1.98
SSBP1Q04837 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.69□□□□□ -1.98
SSBP1Q04837 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.69□□□□□ -1.98
SSBP1Q04837 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.69□□□□□ -1.98
SSBP1Q04837 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.69□□□□□ -1.98
SSBP1Q04837 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC2.69□□□□□ -1.98
SSBP1Q04837 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.69□□□□□ -1.98
SSBP1Q04837 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SSBP1Q04837 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.69□□□□□ -1.98
SSBP1Q04837 AC073657.2-201ENST00000605661 303 ntBASIC2.69□□□□□ -1.98
SSBP1Q04837 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SSBP1Q04837 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC2.69□□□□□ -1.98
SSBP1Q04837 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.69□□□□□ -1.98
SSBP1Q04837 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.69□□□□□ -1.98
SSBP1Q04837 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SSBP1Q04837 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SSBP1Q04837 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SSBP1Q04837 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.68□□□□□ -1.98
SSBP1Q04837 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.68□□□□□ -1.98
SSBP1Q04837 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.68□□□□□ -1.98
SSBP1Q04837 AC013268.2-201ENST00000420753 337 ntBASIC2.68□□□□□ -1.98
SSBP1Q04837 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC2.68□□□□□ -1.98
SSBP1Q04837 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SSBP1Q04837 ATP5JP1-201ENST00000431631 322 ntBASIC2.68□□□□□ -1.98
SSBP1Q04837 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC2.68□□□□□ -1.98
SSBP1Q04837 AL353597.2-202ENST00000434901 373 ntBASIC2.68□□□□□ -1.98
SSBP1Q04837 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.68□□□□□ -1.98
SSBP1Q04837 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC2.68□□□□□ -1.98
SSBP1Q04837 AC087385.1-201ENST00000475062 312 ntBASIC2.68□□□□□ -1.98
SSBP1Q04837 RN7SL633P-201ENST00000488974 297 ntBASIC2.68□□□□□ -1.98
SSBP1Q04837 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SSBP1Q04837 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.68□□□□□ -1.98
SSBP1Q04837 IGKV2-26-201ENST00000518305 343 ntBASIC2.68□□□□□ -1.98
SSBP1Q04837 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.68□□□□□ -1.98
SSBP1Q04837 AGGF1P6-201ENST00000569213 976 ntBASIC2.68□□□□□ -1.98
SSBP1Q04837 MTCO3P13-201ENST00000577757 781 ntBASIC2.68□□□□□ -1.98
SSBP1Q04837 MAGOH2P-202ENST00000584384 429 ntBASIC2.68□□□□□ -1.98
SSBP1Q04837 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.68□□□□□ -1.98
SSBP1Q04837 uc_338.25-201ENST00000613756 156 ntBASIC2.68□□□□□ -1.98
SSBP1Q04837 MIR6875-201ENST00000617506 72 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms