Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MTCO1P43-201ENST00000431831 488 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 MRPS18BP2-201ENST00000434310 759 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 NPM1P49-201ENST00000448027 714 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 ACTG1P13-201ENST00000486987 1043 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 AC010460.1-201ENST00000507087 466 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 IGKV2D-10-201ENST00000520194 281 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 AP000926.4-201ENST00000527351 454 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 AC234775.3-201ENST00000564612 656 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 SNORA62.6-201ENST00000606322 83 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 AC112503.1-201ENST00000608436 391 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 MIR6748-201ENST00000610433 71 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 AL136295.6-201ENST00000610486 658 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 MIR378J-201ENST00000611988 109 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 AC243654.2-201ENST00000612843 443 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 AC079684.1-201ENST00000621405 437 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 AL732372.2-225ENST00000642124 456 ntBASIC2.79□□□□□ -1.96
HIST1H1AQ02539 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
HIST1H1AQ02539 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 AP004289.2-201ENST00000444413 1457 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 AC110774.1-201ENST00000623567 2018 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 AP002088.1-201ENST00000382740 395 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 MIR153-1-201ENST00000384914 90 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 SKINT1L-201ENST00000401057 817 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 AL136116.1-201ENST00000403591 381 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 SNORA3.3-201ENST00000408712 125 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 MTND2P15-201ENST00000418575 892 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 OSTCP5-201ENST00000425293 453 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 RPS27AP12-201ENST00000429552 465 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 BX679664.1-201ENST00000434429 253 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 RPL21P89-201ENST00000444021 467 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 HSFY6P-201ENST00000445573 403 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 RPL7P5-201ENST00000471472 736 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 LARP7P4-201ENST00000481075 878 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 RPS3AP50-201ENST00000487064 803 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 TPT1P3-201ENST00000492841 512 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 AL139099.1-201ENST00000497398 403 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 OR5AP1P-201ENST00000529730 940 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 CYCSP30-201ENST00000546447 172 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 AC010928.3-201ENST00000587712 541 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 uc_338.9-201ENST00000617424 182 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 MIR6875-201ENST00000617506 72 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 ZYXP1-201ENST00000617638 118 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 CDRT1-208ENST00000630868 794 ntBASIC2.78□□□□□ -1.96
HIST1H1AQ02539 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC2.78□□□□□ -1.96
HIST1H1AQ02539 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
HIST1H1AQ02539 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 RNA5SP283-201ENST00000365604 119 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 RNU6-213P-201ENST00000384051 104 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 MTND2P16-201ENST00000419987 799 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AL158071.1-201ENST00000430315 461 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AC010655.1-201ENST00000449336 292 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 U3.44-201ENST00000458938 192 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 RPL31P13-201ENST00000484151 370 ntBASIC2.77□□□□□ -1.97
HIST1H1AQ02539 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.77□□□□□ -1.97
HIST1H1AQ02539 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms