Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RPL23AP62-201ENST00000463396 453 ntBASIC3.9□□□□□ -1.79
TPM4P67936 RPL21P103-201ENST00000479921 488 ntBASIC3.9□□□□□ -1.79
TPM4P67936 AC021205.2-201ENST00000480069 347 ntBASIC3.9□□□□□ -1.79
TPM4P67936 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.9□□□□□ -1.79
TPM4P67936 AC010460.1-201ENST00000507087 466 ntBASIC3.9□□□□□ -1.79
TPM4P67936 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.9□□□□□ -1.79
TPM4P67936 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.9□□□□□ -1.79
TPM4P67936 AC068657.1-201ENST00000520807 306 ntBASIC3.9□□□□□ -1.79
TPM4P67936 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.9□□□□□ -1.79
TPM4P67936 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.9□□□□□ -1.79
TPM4P67936 AC009948.4-201ENST00000604692 675 ntBASIC3.9□□□□□ -1.79
TPM4P67936 AC099778.2-201ENST00000610904 211 ntBASIC3.9□□□□□ -1.79
TPM4P67936 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.9□□□□□ -1.79
TPM4P67936 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.79
TPM4P67936 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TPM4P67936 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TPM4P67936 RNU6-666P-201ENST00000363499 107 ntBASIC3.89□□□□□ -1.79
TPM4P67936 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
TPM4P67936 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
TPM4P67936 MIR30B-201ENST00000384850 88 ntBASIC3.89□□□□□ -1.79
TPM4P67936 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.89□□□□□ -1.79
TPM4P67936 GTF2IP23-201ENST00000423746 351 ntBASIC3.89□□□□□ -1.79
TPM4P67936 BRWD1P3-201ENST00000428816 390 ntBASIC3.89□□□□□ -1.79
TPM4P67936 RPL23AP22-201ENST00000437556 453 ntBASIC3.89□□□□□ -1.79
TPM4P67936 FTH1P1-201ENST00000437933 532 ntBASIC3.89□□□□□ -1.79
TPM4P67936 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.89□□□□□ -1.79
TPM4P67936 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.89□□□□□ -1.79
TPM4P67936 HMGN2P21-201ENST00000447764 270 ntBASIC3.89□□□□□ -1.79
TPM4P67936 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.89□□□□□ -1.79
TPM4P67936 AC092185.1-201ENST00000491371 97 ntBASIC3.89□□□□□ -1.79
TPM4P67936 RPL30P11-201ENST00000495304 339 ntBASIC3.89□□□□□ -1.79
TPM4P67936 RPL5P23-201ENST00000496040 868 ntBASIC3.89□□□□□ -1.79
TPM4P67936 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
TPM4P67936 CDH12P2-201ENST00000504393 298 ntBASIC3.89□□□□□ -1.79
TPM4P67936 AC114967.1-201ENST00000504890 259 ntBASIC3.89□□□□□ -1.79
TPM4P67936 SNORA64.4-201ENST00000516632 81 ntBASIC3.89□□□□□ -1.79
TPM4P67936 OR4A2P-201ENST00000527276 913 ntBASIC3.89□□□□□ -1.79
TPM4P67936 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.89□□□□□ -1.79
TPM4P67936 CR383656.6-201ENST00000550518 394 ntBASIC3.89□□□□□ -1.79
TPM4P67936 AGGF1P6-201ENST00000569213 976 ntBASIC3.89□□□□□ -1.79
TPM4P67936 AC087499.8-201ENST00000578406 226 ntBASIC3.89□□□□□ -1.79
TPM4P67936 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.89□□□□□ -1.79
TPM4P67936 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.89□□□□□ -1.79
TPM4P67936 AC105429.2-201ENST00000610567 517 ntBASIC3.89□□□□□ -1.79
TPM4P67936 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.89□□□□□ -1.79
TPM4P67936 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TPM4P67936 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
TPM4P67936 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
TPM4P67936 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
TPM4P67936 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
TPM4P67936 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
TPM4P67936 AL133383.2-201ENST00000622958 2336 ntBASIC3.88□□□□□ -1.79
TPM4P67936 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.88□□□□□ -1.79
TPM4P67936 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TPM4P67936 SPRR2C-201ENST00000290702 219 ntBASIC3.88□□□□□ -1.79
TPM4P67936 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TPM4P67936 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TPM4P67936 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
TPM4P67936 RNU1-32P-201ENST00000363937 159 ntBASIC3.88□□□□□ -1.79
TPM4P67936 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.88□□□□□ -1.79
TPM4P67936 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
TPM4P67936 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TPM4P67936 PTMAP5-201ENST00000393073 333 ntBASIC3.88□□□□□ -1.79
TPM4P67936 RN7SKP53-201ENST00000411337 315 ntBASIC3.88□□□□□ -1.79
TPM4P67936 AC126124.2-201ENST00000413542 321 ntBASIC3.88□□□□□ -1.79
TPM4P67936 AC004022.2-201ENST00000413824 193 ntBASIC3.88□□□□□ -1.79
TPM4P67936 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.88□□□□□ -1.79
TPM4P67936 AL117339.2-201ENST00000430475 180 ntBASIC3.88□□□□□ -1.79
TPM4P67936 B3GNT2P1-201ENST00000434960 952 ntBASIC3.88□□□□□ -1.79
TPM4P67936 CEACAMP9-201ENST00000442990 513 ntBASIC3.88□□□□□ -1.79
TPM4P67936 AC008264.1-201ENST00000447612 367 ntBASIC3.88□□□□□ -1.79
TPM4P67936 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.88□□□□□ -1.79
TPM4P67936 AL133162.1-201ENST00000463228 453 ntBASIC3.88□□□□□ -1.79
TPM4P67936 SNRPGP3-201ENST00000469405 227 ntBASIC3.88□□□□□ -1.79
TPM4P67936 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.88□□□□□ -1.79
TPM4P67936 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.88□□□□□ -1.79
TPM4P67936 MIR2276-201ENST00000516886 89 ntBASIC3.88□□□□□ -1.79
TPM4P67936 RNA5SP380-201ENST00000517190 98 ntBASIC3.88□□□□□ -1.79
TPM4P67936 RANP9-201ENST00000519957 271 ntBASIC3.88□□□□□ -1.79
TPM4P67936 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.88□□□□□ -1.79
TPM4P67936 EIF4EP5-201ENST00000528228 640 ntBASIC3.88□□□□□ -1.79
TPM4P67936 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.88□□□□□ -1.79
TPM4P67936 AP000919.1-202ENST00000581139 1264 ntBASIC3.88□□□□□ -1.79
TPM4P67936 FAM60CP-201ENST00000591086 664 ntBASIC3.88□□□□□ -1.79
TPM4P67936 AC104785.1-201ENST00000603220 588 ntBASIC3.88□□□□□ -1.79
TPM4P67936 LLPHP1-201ENST00000603571 367 ntBASIC3.88□□□□□ -1.79
TPM4P67936 RNU1-30P-201ENST00000606575 163 ntBASIC3.88□□□□□ -1.79
TPM4P67936 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.88□□□□□ -1.79
TPM4P67936 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.88□□□□□ -1.79
TPM4P67936 AC005962.2-201ENST00000611427 652 ntBASIC3.88□□□□□ -1.79
TPM4P67936 AL354798.1-201ENST00000622505 329 ntBASIC3.88□□□□□ -1.79
TPM4P67936 AL353743.4-201ENST00000422653 1547 ntBASIC3.88□□□□□ -1.79
TPM4P67936 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TPM4P67936 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TPM4P67936 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TPM4P67936 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.88□□□□□ -1.79
TPM4P67936 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
TPM4P67936 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.87□□□□□ -1.79
TPM4P67936 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TPM4P67936 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms