Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MIR8059-201ENST00000620427 81 ntBASIC3.61□□□□□ -1.83
LMO4P61968 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.61□□□□□ -1.83
LMO4P61968 AC098679.5-201ENST00000624394 571 ntBASIC3.61□□□□□ -1.83
LMO4P61968 CDRT1-208ENST00000630868 794 ntBASIC3.61□□□□□ -1.83
LMO4P61968 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LMO4P61968 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LMO4P61968 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LMO4P61968 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LMO4P61968 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
LMO4P61968 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LMO4P61968 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LMO4P61968 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LMO4P61968 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LMO4P61968 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LMO4P61968 AC000374.1-201ENST00000434698 1745 ntBASIC3.61□□□□□ -1.83
LMO4P61968 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.61□□□□□ -1.83
LMO4P61968 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LMO4P61968 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LMO4P61968 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LMO4P61968 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LMO4P61968 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LMO4P61968 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
LMO4P61968 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC3.6□□□□□ -1.83
LMO4P61968 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LMO4P61968 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 Y_RNA.126-201ENST00000363382 111 ntBASIC3.6□□□□□ -1.83
LMO4P61968 RNA5SP175-201ENST00000364275 119 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AL583835.1-201ENST00000399570 407 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AL022722.2-201ENST00000402519 180 ntBASIC3.6□□□□□ -1.83
LMO4P61968 RNA5SP317-201ENST00000410176 116 ntBASIC3.6□□□□□ -1.83
LMO4P61968 RNA5SP311-201ENST00000411290 116 ntBASIC3.6□□□□□ -1.83
LMO4P61968 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.6□□□□□ -1.83
LMO4P61968 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.6□□□□□ -1.83
LMO4P61968 RPL17P36-201ENST00000420302 549 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AL365203.2-201ENST00000423444 196 ntBASIC3.6□□□□□ -1.83
LMO4P61968 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.6□□□□□ -1.83
LMO4P61968 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.6□□□□□ -1.83
LMO4P61968 AL157831.1-201ENST00000426134 473 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 HSFY3P-201ENST00000444242 1191 ntBASIC3.6□□□□□ -1.83
LMO4P61968 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.6□□□□□ -1.83
LMO4P61968 HMGB3P6-201ENST00000444896 598 ntBASIC3.6□□□□□ -1.83
LMO4P61968 MTND2P19-201ENST00000449129 1012 ntBASIC3.6□□□□□ -1.83
LMO4P61968 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.6□□□□□ -1.83
LMO4P61968 DDX39BP2-208ENST00000453923 258 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AL035407.2-201ENST00000454090 378 ntBASIC3.6□□□□□ -1.83
LMO4P61968 RPL23AP71-201ENST00000470966 469 ntBASIC3.6□□□□□ -1.83
LMO4P61968 MTND3P7-201ENST00000474435 343 ntBASIC3.6□□□□□ -1.83
LMO4P61968 UBA52P3-201ENST00000491303 382 ntBASIC3.6□□□□□ -1.83
LMO4P61968 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.6□□□□□ -1.83
LMO4P61968 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.6□□□□□ -1.83
LMO4P61968 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.6□□□□□ -1.83
LMO4P61968 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.6□□□□□ -1.83
LMO4P61968 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.6□□□□□ -1.83
LMO4P61968 RNA5SP315-201ENST00000516340 116 ntBASIC3.6□□□□□ -1.83
LMO4P61968 RNA5SP312-201ENST00000517068 116 ntBASIC3.6□□□□□ -1.83
LMO4P61968 MIR2116-201ENST00000517221 80 ntBASIC3.6□□□□□ -1.83
LMO4P61968 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LMO4P61968 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.6□□□□□ -1.83
LMO4P61968 AC023161.2-201ENST00000551218 780 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.6□□□□□ -1.83
LMO4P61968 SETP1-201ENST00000556014 845 ntBASIC3.6□□□□□ -1.83
LMO4P61968 TVP23BP1-201ENST00000557500 617 ntBASIC3.6□□□□□ -1.83
LMO4P61968 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.6□□□□□ -1.83
LMO4P61968 AC027807.1-201ENST00000559921 996 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AC084757.1-201ENST00000559987 490 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 AC090751.1-201ENST00000566966 267 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.6□□□□□ -1.83
LMO4P61968 AC090312.1-201ENST00000580637 348 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.6□□□□□ -1.83
LMO4P61968 DEFB131E-202ENST00000602581 683 ntBASIC3.6□□□□□ -1.83
LMO4P61968 DPRXP5-201ENST00000604662 539 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AL354984.3-201ENST00000604803 325 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AC105129.3-201ENST00000605455 485 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AL591034.3-201ENST00000605511 685 ntBASIC3.6□□□□□ -1.83
LMO4P61968 OR2BH1P-201ENST00000608850 864 ntBASIC3.6□□□□□ -1.83
LMO4P61968 STMN1P1-201ENST00000617809 440 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AC007490.1-201ENST00000624321 703 ntBASIC3.6□□□□□ -1.83
LMO4P61968 AP003072.4-201ENST00000624580 310 ntBASIC3.6□□□□□ -1.83
LMO4P61968 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.6□□□□□ -1.83
LMO4P61968 ATE1-AS1-202ENST00000636460 506 ntBASIC3.6□□□□□ -1.83
LMO4P61968 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
LMO4P61968 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LMO4P61968 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LMO4P61968 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms