Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC093519.1-201ENST00000566109 298 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.17□□□□□ -1.74
CDH13P55290 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH13P55290 AC106052.1-201ENST00000608029 497 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AL049539.1-201ENST00000611964 459 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AC064801.1-201ENST00000612025 407 ntBASIC4.17□□□□□ -1.74
CDH13P55290 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.17□□□□□ -1.74
CDH13P55290 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH13P55290 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.17□□□□□ -1.74
CDH13P55290 AC068787.1-201ENST00000623908 691 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH13P55290 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
CDH13P55290 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CDH13P55290 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDH13P55290 AC012020.1-201ENST00000624541 1728 ntBASIC4.17□□□□□ -1.74
CDH13P55290 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH13P55290 AL592148.3-201ENST00000608771 2646 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AC090229.1-201ENST00000590983 1609 ntBASIC4.17□□□□□ -1.74
CDH13P55290 AP005901.5-201ENST00000545779 1796 ntBASIC4.17□□□□□ -1.74
CDH13P55290 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.17□□□□□ -1.74
CDH13P55290 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CDH13P55290 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CDH13P55290 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH13P55290 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH13P55290 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH13P55290 ZNF29P-201ENST00000225587 168 ntBASIC4.16□□□□□ -1.74
CDH13P55290 OR5P1P-201ENST00000299512 925 ntBASIC4.16□□□□□ -1.74
CDH13P55290 RNU6-1243P-201ENST00000364028 107 ntBASIC4.16□□□□□ -1.74
CDH13P55290 snoZ40.1-201ENST00000364540 72 ntBASIC4.16□□□□□ -1.74
CDH13P55290 Y_RNA.472-201ENST00000384322 102 ntBASIC4.16□□□□□ -1.74
CDH13P55290 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CDH13P55290 SNORA40.2-201ENST00000390847 128 ntBASIC4.16□□□□□ -1.74
CDH13P55290 RNA5SP39-201ENST00000411245 120 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH13P55290 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH13P55290 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH13P55290 RPS3AP37-201ENST00000419176 745 ntBASIC4.16□□□□□ -1.74
CDH13P55290 RPS15AP40-201ENST00000419621 391 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH13P55290 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH13P55290 AC092648.1-201ENST00000425870 423 ntBASIC4.16□□□□□ -1.74
CDH13P55290 OR4F13P-201ENST00000428478 931 ntBASIC4.16□□□□□ -1.74
CDH13P55290 MTND2P5-201ENST00000432656 1006 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC241584.1-201ENST00000438469 1241 ntBASIC4.16□□□□□ -1.74
CDH13P55290 RPL23AP52-201ENST00000439311 478 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC092393.1-201ENST00000439625 742 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.16□□□□□ -1.74
CDH13P55290 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH13P55290 AL451050.1-201ENST00000450126 415 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AL162388.1-201ENST00000450912 352 ntBASIC4.16□□□□□ -1.74
CDH13P55290 PNPLA4P1-201ENST00000458328 305 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC231760.1-201ENST00000498002 260 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC083829.1-201ENST00000503756 657 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH13P55290 PARP4P3-201ENST00000510265 317 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC110760.3-202ENST00000515177 371 ntBASIC4.16□□□□□ -1.74
CDH13P55290 HNRNPKP5-201ENST00000515300 253 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.16□□□□□ -1.74
CDH13P55290 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH13P55290 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CDH13P55290 PTP4A1P6-201ENST00000531034 478 ntBASIC4.16□□□□□ -1.74
CDH13P55290 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH13P55290 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH13P55290 MIR4458-201ENST00000578872 75 ntBASIC4.16□□□□□ -1.74
CDH13P55290 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH13P55290 VN1R83P-201ENST00000595685 445 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH13P55290 AC021749.1-201ENST00000604322 607 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC010680.4-201ENST00000605334 543 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC024940.4-201ENST00000605507 246 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC069545.1-201ENST00000605671 358 ntBASIC4.16□□□□□ -1.74
CDH13P55290 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH13P55290 MIR7703-201ENST00000620784 77 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AP001784.1-201ENST00000624107 428 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC026634.1-201ENST00000634369 198 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC008013.2-202ENST00000637965 364 ntBASIC4.16□□□□□ -1.74
CDH13P55290 AC025031.4-201ENST00000621248 3271 ntBASIC4.16□□□□□ -1.74
CDH13P55290 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH13P55290 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CDH13P55290 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH13P55290 AL122126.1-201ENST00000546905 1318 ntBASIC4.16□□□□□ -1.74
CDH13P55290 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH13P55290 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.16□□□□□ -1.74
CDH13P55290 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH13P55290 MFSD8-242ENST00000641690 4199 ntBASIC4.15□□□□□ -1.74
CDH13P55290 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH13P55290 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.15□□□□□ -1.74
CDH13P55290 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CDH13P55290 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CDH13P55290 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDH13P55290 AC079741.1-201ENST00000321498 212 ntBASIC4.15□□□□□ -1.75
CDH13P55290 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDH13P55290 RNU6-251P-201ENST00000363235 104 ntBASIC4.15□□□□□ -1.75
CDH13P55290 RNU6-1066P-201ENST00000363573 105 ntBASIC4.15□□□□□ -1.75
CDH13P55290 RNU6-441P-201ENST00000384545 106 ntBASIC4.15□□□□□ -1.75
CDH13P55290 SNORD65.1-201ENST00000390889 71 ntBASIC4.15□□□□□ -1.75
CDH13P55290 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDH13P55290 BTBD10P2-201ENST00000404779 676 ntBASIC4.15□□□□□ -1.75
CDH13P55290 AL133264.1-201ENST00000407157 562 ntBASIC4.15□□□□□ -1.75
CDH13P55290 SNORA11F-201ENST00000408237 128 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms