Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
CASQ1P31415 AL138880.1-201ENST00000405824 642 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 RN7SKP33-201ENST00000410942 340 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 RNU6-55P-201ENST00000411092 107 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 RNU6-954P-201ENST00000411355 107 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 RPS7P13-201ENST00000413955 498 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 BX510359.3-201ENST00000422168 306 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 TRIAP1P1-201ENST00000427062 225 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.97□□□□□ -1.77
CASQ1P31415 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.97□□□□□ -1.77
CASQ1P31415 HIGD1AP11-201ENST00000438361 280 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 CBX1P1-201ENST00000440184 427 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 snoU13.1-201ENST00000459157 104 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.97□□□□□ -1.77
CASQ1P31415 RN7SL442P-201ENST00000473804 320 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
CASQ1P31415 RPS4XP22-201ENST00000480755 780 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 RPS3AP6-201ENST00000484430 795 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 HMGB1P38-201ENST00000490557 577 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 AC092185.1-201ENST00000491371 97 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 AP000926.3-201ENST00000497201 299 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.97□□□□□ -1.77
CASQ1P31415 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.97□□□□□ -1.77
CASQ1P31415 NDUFA5P2-201ENST00000519723 344 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 AC022616.2-201ENST00000523185 300 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 AC006518.1-201ENST00000541449 943 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 AP003717.3-201ENST00000544832 1180 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.97□□□□□ -1.77
CASQ1P31415 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CASQ1P31415 SNORA62.6-201ENST00000606322 83 ntBASIC3.97□□□□□ -1.77
CASQ1P31415 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CASQ1P31415 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CASQ1P31415 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.97□□□□□ -1.77
CASQ1P31415 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CASQ1P31415 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.96□□□□□ -1.77
CASQ1P31415 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.96□□□□□ -1.77
CASQ1P31415 SRP72P2-201ENST00000344851 1979 ntBASIC3.96□□□□□ -1.77
CASQ1P31415 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CASQ1P31415 AL513302.2-201ENST00000562313 1842 ntBASIC3.96□□□□□ -1.78
CASQ1P31415 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CASQ1P31415 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CASQ1P31415 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
CASQ1P31415 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CASQ1P31415 RNA5SP424-201ENST00000390988 115 ntBASIC3.96□□□□□ -1.78
CASQ1P31415 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.96□□□□□ -1.78
CASQ1P31415 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.96□□□□□ -1.78
CASQ1P31415 OSTCP5-201ENST00000425293 453 ntBASIC3.96□□□□□ -1.78
CASQ1P31415 AL160175.1-201ENST00000428124 247 ntBASIC3.96□□□□□ -1.78
CASQ1P31415 OR6C71P-201ENST00000432580 913 ntBASIC3.96□□□□□ -1.78
CASQ1P31415 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.96□□□□□ -1.78
CASQ1P31415 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.96□□□□□ -1.78
CASQ1P31415 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.96□□□□□ -1.78
CASQ1P31415 SSXP4-201ENST00000451349 245 ntBASIC3.96□□□□□ -1.78
CASQ1P31415 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.96□□□□□ -1.78
CASQ1P31415 AC010401.1-201ENST00000463867 348 ntBASIC3.96□□□□□ -1.78
CASQ1P31415 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.96□□□□□ -1.78
CASQ1P31415 AC093720.1-201ENST00000505681 714 ntBASIC3.96□□□□□ -1.78
CASQ1P31415 MTND4LP22-201ENST00000508209 276 ntBASIC3.96□□□□□ -1.78
CASQ1P31415 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.96□□□□□ -1.78
CASQ1P31415 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.96□□□□□ -1.78
CASQ1P31415 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CASQ1P31415 AL121594.4-201ENST00000556211 1196 ntBASIC3.96□□□□□ -1.78
CASQ1P31415 TRAV15-201ENST00000556680 249 ntBASIC3.96□□□□□ -1.78
CASQ1P31415 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.96□□□□□ -1.78
CASQ1P31415 MIR4480-201ENST00000582492 71 ntBASIC3.96□□□□□ -1.78
CASQ1P31415 MIR8059-201ENST00000620427 81 ntBASIC3.96□□□□□ -1.78
CASQ1P31415 AC018445.2-201ENST00000622987 260 ntBASIC3.96□□□□□ -1.78
CASQ1P31415 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.96□□□□□ -1.78
CASQ1P31415 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.96□□□□□ -1.78
CASQ1P31415 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CASQ1P31415 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CASQ1P31415 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CASQ1P31415 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CASQ1P31415 AC110774.1-201ENST00000623567 2018 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 MAPK10-362ENST00000641864 4484 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.95□□□□□ -1.78
CASQ1P31415 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CASQ1P31415 RPL7P26-201ENST00000333817 754 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 MIR30E-201ENST00000362104 92 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 RNA5SP42-201ENST00000364278 115 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC3.95□□□□□ -1.78
CASQ1P31415 ENSAP1-201ENST00000392855 326 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 AL035419.1-201ENST00000397037 564 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 RNA5SP293-201ENST00000410527 113 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 LINC01881-201ENST00000416103 412 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CASQ1P31415 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CASQ1P31415 AC023128.2-201ENST00000420880 1223 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 RPL23AP38-201ENST00000423801 469 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.95□□□□□ -1.78
CASQ1P31415 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.95□□□□□ -1.78
CASQ1P31415 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.95□□□□□ -1.78
CASQ1P31415 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.95□□□□□ -1.78
CASQ1P31415 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.95□□□□□ -1.78
CASQ1P31415 AC104308.1-201ENST00000454621 333 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.95□□□□□ -1.78
CASQ1P31415 HMGN1P8-201ENST00000463578 288 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 RN7SL303P-201ENST00000469773 251 ntBASIC3.95□□□□□ -1.78
CASQ1P31415 AC087312.1-201ENST00000471411 480 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms