Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 DUXAP8-207ENST00000456786 622 ntBASIC4.19□□□□□ -1.74
CDH3P22223 RPL6P9-201ENST00000466502 859 ntBASIC4.19□□□□□ -1.74
CDH3P22223 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CDH3P22223 AC068587.1-201ENST00000483613 781 ntBASIC4.19□□□□□ -1.74
CDH3P22223 AC105137.1-201ENST00000484355 562 ntBASIC4.19□□□□□ -1.74
CDH3P22223 AC108729.1-201ENST00000487812 947 ntBASIC4.19□□□□□ -1.74
CDH3P22223 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH3P22223 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH3P22223 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH3P22223 IGBP1P5-201ENST00000507524 1000 ntBASIC4.19□□□□□ -1.74
CDH3P22223 AC010285.3-201ENST00000511668 676 ntBASIC4.19□□□□□ -1.74
CDH3P22223 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH3P22223 Vault.1-201ENST00000516474 102 ntBASIC4.19□□□□□ -1.74
CDH3P22223 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH3P22223 MTND2P32-201ENST00000521584 1038 ntBASIC4.19□□□□□ -1.74
CDH3P22223 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH3P22223 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH3P22223 TVP23BP1-201ENST00000557500 617 ntBASIC4.19□□□□□ -1.74
CDH3P22223 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CDH3P22223 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH3P22223 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH3P22223 MTND1P8-201ENST00000571424 950 ntBASIC4.19□□□□□ -1.74
CDH3P22223 MTND4LP24-201ENST00000572277 291 ntBASIC4.19□□□□□ -1.74
CDH3P22223 AC136624.4-201ENST00000573044 370 ntBASIC4.19□□□□□ -1.74
CDH3P22223 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH3P22223 AC115085.1-201ENST00000588924 229 ntBASIC4.19□□□□□ -1.74
CDH3P22223 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CDH3P22223 AP002360.3-201ENST00000607673 710 ntBASIC4.19□□□□□ -1.74
CDH3P22223 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH3P22223 DUXAP10-204ENST00000612052 616 ntBASIC4.19□□□□□ -1.74
CDH3P22223 AC023043.4-201ENST00000612081 449 ntBASIC4.19□□□□□ -1.74
CDH3P22223 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH3P22223 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CDH3P22223 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH3P22223 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH3P22223 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH3P22223 AL158163.1-201ENST00000603915 1649 ntBASIC4.19□□□□□ -1.74
CDH3P22223 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH3P22223 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CDH3P22223 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH3P22223 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH3P22223 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH3P22223 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH3P22223 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH3P22223 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH3P22223 FAM35DP-201ENST00000323387 2712 ntBASIC4.18□□□□□ -1.74
CDH3P22223 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH3P22223 MTCO1P6-201ENST00000481192 1384 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AC005261.4-201ENST00000600047 1385 ntBASIC4.18□□□□□ -1.74
CDH3P22223 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH3P22223 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH3P22223 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH3P22223 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
CDH3P22223 MIR383-201ENST00000362257 73 ntBASIC4.18□□□□□ -1.74
CDH3P22223 RNA5SP22-201ENST00000365393 109 ntBASIC4.18□□□□□ -1.74
CDH3P22223 RNA5SP366-201ENST00000365454 123 ntBASIC4.18□□□□□ -1.74
CDH3P22223 RNA5SP151-201ENST00000365632 117 ntBASIC4.18□□□□□ -1.74
CDH3P22223 RNU1-44P-201ENST00000384453 163 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.18□□□□□ -1.74
CDH3P22223 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH3P22223 LIPT1P1-201ENST00000415870 1186 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH3P22223 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH3P22223 RPL31P45-201ENST00000419532 356 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH3P22223 RPL23AP38-201ENST00000423801 469 ntBASIC4.18□□□□□ -1.74
CDH3P22223 OSTCP5-201ENST00000425293 453 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH3P22223 USP12PY-201ENST00000427677 1064 ntBASIC4.18□□□□□ -1.74
CDH3P22223 RPL7P4-203ENST00000430239 730 ntBASIC4.18□□□□□ -1.74
CDH3P22223 Z80107.1-201ENST00000436830 412 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH3P22223 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH3P22223 RPS7P5-201ENST00000441482 581 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AL358794.1-201ENST00000445689 381 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AC090013.1-201ENST00000485147 480 ntBASIC4.18□□□□□ -1.74
CDH3P22223 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
CDH3P22223 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH3P22223 AC010306.1-201ENST00000523223 1117 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AC104417.1-201ENST00000523974 751 ntBASIC4.18□□□□□ -1.74
CDH3P22223 NDUFS5P6-201ENST00000529136 295 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH3P22223 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.18□□□□□ -1.74
CDH3P22223 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH3P22223 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AL360157.1-201ENST00000565962 87 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AC090751.1-201ENST00000566966 267 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AC069366.1-201ENST00000583159 838 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AL160237.3-201ENST00000604114 1013 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AC024060.1-201ENST00000607052 494 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AL021997.2-201ENST00000615674 271 ntBASIC4.18□□□□□ -1.74
CDH3P22223 AC016717.3-201ENST00000624730 554 ntBASIC4.18□□□□□ -1.74
CDH3P22223 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH3P22223 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.18□□□□□ -1.74
CDH3P22223 FP325313.1-201ENST00000638228 703 ntBASIC4.18□□□□□ -1.74
CDH3P22223 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH3P22223 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH3P22223 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH3P22223 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH3P22223 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms