Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 AC141257.3-201ENST00000572906 215 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AC022884.2-201ENST00000578535 580 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 MTCYBP13-201ENST00000578634 1093 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 MIR4646-201ENST00000580775 63 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 MIR4691-201ENST00000583764 85 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN1P18031 AC105254.2-201ENST00000603636 436 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 IMMP1LP1-201ENST00000605170 488 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AP000860.1-201ENST00000605250 559 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AC091304.9-201ENST00000612091 226 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 EIF3FP1-201ENST00000613970 806 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
PTPN1P18031 CR381653.2-201ENST00000624041 768 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN1P18031 AC093591.3-201ENST00000634516 308 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 CRYM-AS1-204ENST00000637983 556 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PTPN1P18031 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN1P18031 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN1P18031 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN1P18031 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN1P18031 DCAF13P1-201ENST00000495256 1330 ntBASIC5.41□□□□□ -1.54
PTPN1P18031 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.41□□□□□ -1.54
PTPN1P18031 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN1P18031 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PTPN1P18031 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTPN1P18031 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.4□□□□□ -1.54
PTPN1P18031 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.4□□□□□ -1.54
PTPN1P18031 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PTPN1P18031 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN1P18031 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN1P18031 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN1P18031 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN1P18031 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN1P18031 Y_RNA.97-201ENST00000363094 102 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN1P18031 AL078599.1-201ENST00000402075 293 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 RNU2-65P-201ENST00000410162 185 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 RPL12P9-201ENST00000412942 488 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN1P18031 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.4□□□□□ -1.54
PTPN1P18031 AL158073.1-201ENST00000426848 1104 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.4□□□□□ -1.54
PTPN1P18031 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN1P18031 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN1P18031 RPL37P21-201ENST00000435890 276 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 RHOT1P3-201ENST00000436571 331 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 AP000936.3-201ENST00000438127 255 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.4□□□□□ -1.54
PTPN1P18031 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN1P18031 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN1P18031 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN1P18031 VN1R34P-201ENST00000447387 883 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN1P18031 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.4□□□□□ -1.54
PTPN1P18031 CBX1P2-201ENST00000453841 458 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN1P18031 RPS3AP17-201ENST00000472594 777 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.4□□□□□ -1.54
PTPN1P18031 AC021678.1-201ENST00000505195 936 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.4□□□□□ -1.54
PTPN1P18031 COX6B1P5-201ENST00000509843 249 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN1P18031 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN1P18031 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.4□□□□□ -1.54
PTPN1P18031 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN1P18031 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN1P18031 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.4□□□□□ -1.54
PTPN1P18031 AC006960.3-201ENST00000561845 705 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 BGLT3-201ENST00000564523 994 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.4□□□□□ -1.54
PTPN1P18031 AC115085.1-201ENST00000588924 229 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 PRELID3BP8-201ENST00000604148 295 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 AP001521.1-201ENST00000609150 300 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 AC103710.4-201ENST00000609301 899 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PTPN1P18031 AC131902.3-201ENST00000611767 581 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 AL359535.1-201ENST00000612100 1087 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 AL139089.1-201ENST00000620372 975 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 AC005609.4-201ENST00000625071 447 ntBASIC5.4□□□□□ -1.54
PTPN1P18031 SMG1P7-201ENST00000565246 2704 ntBASIC5.4□□□□□ -1.55
PTPN1P18031 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.4□□□□□ -1.55
PTPN1P18031 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PTPN1P18031 CR848007.1-201ENST00000442354 1699 ntBASIC5.4□□□□□ -1.55
PTPN1P18031 OR4G11P-202ENST00000642116 1414 ntBASIC5.4□□□□□ -1.55
PTPN1P18031 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTPN1P18031 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PTPN1P18031 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.39□□□□□ -1.55
PTPN1P18031 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.39□□□□□ -1.55
PTPN1P18031 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.39□□□□□ -1.55
PTPN1P18031 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTPN1P18031 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTPN1P18031 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTPN1P18031 AL450345.1-202ENST00000605741 3881 ntBASIC5.39□□□□□ -1.55
PTPN1P18031 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PTPN1P18031 ADAM5-202ENST00000399789 1942 ntBASIC5.39□□□□□ -1.55
PTPN1P18031 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms