Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TOP2AP11388 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TOP2AP11388 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TOP2AP11388 AL672296.1-201ENST00000427780 2158 ntBASIC5.61□□□□□ -1.51
TOP2AP11388 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TOP2AP11388 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TOP2AP11388 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TOP2AP11388 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.6□□□□□ -1.51
TOP2AP11388 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TOP2AP11388 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.6□□□□□ -1.51
TOP2AP11388 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
TOP2AP11388 AC062016.1-201ENST00000355719 319 ntBASIC5.6□□□□□ -1.51
TOP2AP11388 AL391417.1-201ENST00000404100 426 ntBASIC5.6□□□□□ -1.51
TOP2AP11388 HMGB3P18-201ENST00000406327 590 ntBASIC5.6□□□□□ -1.51
TOP2AP11388 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.6□□□□□ -1.51
TOP2AP11388 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC5.6□□□□□ -1.51
TOP2AP11388 AC073587.1-201ENST00000447093 876 ntBASIC5.6□□□□□ -1.51
TOP2AP11388 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.6□□□□□ -1.51
TOP2AP11388 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.6□□□□□ -1.51
TOP2AP11388 CCDC75P1-201ENST00000469247 791 ntBASIC5.6□□□□□ -1.51
TOP2AP11388 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.6□□□□□ -1.51
TOP2AP11388 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.6□□□□□ -1.51
TOP2AP11388 AC099489.2-201ENST00000574976 260 ntBASIC5.6□□□□□ -1.51
TOP2AP11388 AC015849.2-201ENST00000605738 409 ntBASIC5.6□□□□□ -1.51
TOP2AP11388 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TOP2AP11388 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TOP2AP11388 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TOP2AP11388 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
TOP2AP11388 MTND4LP20-201ENST00000402379 270 ntBASIC5.59□□□□□ -1.51
TOP2AP11388 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TOP2AP11388 PCBP2P3-201ENST00000509726 843 ntBASIC5.59□□□□□ -1.51
TOP2AP11388 SNORA70.19-201ENST00000516717 90 ntBASIC5.59□□□□□ -1.51
TOP2AP11388 AP002404.1-201ENST00000532005 451 ntBASIC5.59□□□□□ -1.51
TOP2AP11388 RPL12P50-201ENST00000603116 116 ntBASIC5.59□□□□□ -1.51
TOP2AP11388 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.59□□□□□ -1.51
TOP2AP11388 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TOP2AP11388 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TOP2AP11388 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TOP2AP11388 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.59□□□□□ -1.51
TOP2AP11388 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
TOP2AP11388 SNORD67-201ENST00000390833 111 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 ETF1P3-201ENST00000430422 1160 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 AL135938.1-201ENST00000443141 297 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 AC069540.1-201ENST00000446320 988 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 AC005002.1-201ENST00000447458 540 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 AC010307.1-201ENST00000467206 836 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 TRBV8-2-201ENST00000475637 270 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 RN7SKP116-201ENST00000516902 319 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.58□□□□□ -1.52
TOP2AP11388 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.58□□□□□ -1.52
TOP2AP11388 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.58□□□□□ -1.52
TOP2AP11388 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 AC009237.17-201ENST00000618111 748 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 MIR622-201ENST00000638396 96 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 HMGB3P9-201ENST00000441799 583 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 FTH1P25-201ENST00000447665 469 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 S100A11P1-201ENST00000477525 312 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 RPL7P47-201ENST00000497299 556 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.58□□□□□ -1.52
TOP2AP11388 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.58□□□□□ -1.52
TOP2AP11388 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.58□□□□□ -1.52
TOP2AP11388 AP005262.1-201ENST00000582646 997 ntBASIC5.58□□□□□ -1.52
TOP2AP11388 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.58□□□□□ -1.52
TOP2AP11388 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.58□□□□□ -1.52
TOP2AP11388 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
TOP2AP11388 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TOP2AP11388 RNU6-7-201ENST00000364784 107 ntBASIC5.57□□□□□ -1.52
TOP2AP11388 RNU6-8-201ENST00000365467 107 ntBASIC5.57□□□□□ -1.52
TOP2AP11388 RNU1-89P-201ENST00000384592 164 ntBASIC5.57□□□□□ -1.52
TOP2AP11388 AL356968.1-201ENST00000416622 474 ntBASIC5.57□□□□□ -1.52
TOP2AP11388 AC105272.1-201ENST00000438604 198 ntBASIC5.57□□□□□ -1.52
TOP2AP11388 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.57□□□□□ -1.52
TOP2AP11388 CYP2C60P-201ENST00000566088 139 ntBASIC5.57□□□□□ -1.52
TOP2AP11388 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.57□□□□□ -1.52
TOP2AP11388 OR5BR1P-201ENST00000524992 1330 ntBASIC5.57□□□□□ -1.52
TOP2AP11388 AC093849.1-201ENST00000563631 2209 ntBASIC5.57□□□□□ -1.52
TOP2AP11388 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TOP2AP11388 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.57□□□□□ -1.52
TOP2AP11388 RIOK3P1-201ENST00000418778 1528 ntBASIC5.56□□□□□ -1.52
TOP2AP11388 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.56□□□□□ -1.52
TOP2AP11388 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TOP2AP11388 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TOP2AP11388 RN7SKP220-201ENST00000410611 288 ntBASIC5.56□□□□□ -1.52
TOP2AP11388 AC016696.1-201ENST00000446949 318 ntBASIC5.56□□□□□ -1.52
TOP2AP11388 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.56□□□□□ -1.52
TOP2AP11388 SYT14P1-201ENST00000481459 721 ntBASIC5.56□□□□□ -1.52
TOP2AP11388 RPL5P23-201ENST00000496040 868 ntBASIC5.56□□□□□ -1.52
TOP2AP11388 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TOP2AP11388 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.56□□□□□ -1.52
TOP2AP11388 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.56□□□□□ -1.52
TOP2AP11388 AC009948.4-201ENST00000604692 675 ntBASIC5.56□□□□□ -1.52
TOP2AP11388 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.56□□□□□ -1.52
TOP2AP11388 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
TOP2AP11388 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
TOP2AP11388 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
TOP2AP11388 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.55□□□□□ -1.52
TOP2AP11388 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC5.55□□□□□ -1.52
TOP2AP11388 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TOP2AP11388 AC117440.1-201ENST00000474107 571 ntBASIC5.55□□□□□ -1.52
TOP2AP11388 AC087276.1-201ENST00000529659 480 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms