Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.4□□□□□ -1.87
UBCP0CG48 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.4□□□□□ -1.87
UBCP0CG48 AC090616.5-202ENST00000582111 297 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
UBCP0CG48 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
UBCP0CG48 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
UBCP0CG48 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.4□□□□□ -1.87
UBCP0CG48 AC011944.2-201ENST00000624440 683 ntBASIC3.4□□□□□ -1.87
UBCP0CG48 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.4□□□□□ -1.87
UBCP0CG48 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
UBCP0CG48 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
UBCP0CG48 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
UBCP0CG48 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBCP0CG48 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UBCP0CG48 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBCP0CG48 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBCP0CG48 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBCP0CG48 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBCP0CG48 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.39□□□□□ -1.87
UBCP0CG48 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
UBCP0CG48 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UBCP0CG48 RNA5SP443-201ENST00000363083 132 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 PTMAP5-201ENST00000393073 333 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.39□□□□□ -1.87
UBCP0CG48 HSPE1P8-201ENST00000406997 288 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 AC016397.1-201ENST00000412463 242 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 AC009237.5-201ENST00000414271 501 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.39□□□□□ -1.87
UBCP0CG48 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.39□□□□□ -1.87
UBCP0CG48 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.39□□□□□ -1.87
UBCP0CG48 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.39□□□□□ -1.87
UBCP0CG48 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.39□□□□□ -1.87
UBCP0CG48 HMGB1P45-201ENST00000435986 653 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 SKP1P1-201ENST00000438081 489 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 CYCSP43-201ENST00000438233 310 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.39□□□□□ -1.87
UBCP0CG48 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.39□□□□□ -1.87
UBCP0CG48 AC068135.1-201ENST00000446164 246 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.39□□□□□ -1.87
UBCP0CG48 CYCSP42-201ENST00000450823 238 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.39□□□□□ -1.87
UBCP0CG48 RNU6-775P-201ENST00000459318 96 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 AC105137.1-201ENST00000484355 562 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 AC093663.2-201ENST00000484625 313 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.39□□□□□ -1.87
UBCP0CG48 AC106806.2-201ENST00000509365 500 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.39□□□□□ -1.87
UBCP0CG48 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.39□□□□□ -1.87
UBCP0CG48 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.39□□□□□ -1.87
UBCP0CG48 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.39□□□□□ -1.87
UBCP0CG48 AC138701.1-201ENST00000524329 714 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 AP003730.1-201ENST00000524605 285 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UBCP0CG48 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.39□□□□□ -1.87
UBCP0CG48 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.39□□□□□ -1.87
UBCP0CG48 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.39□□□□□ -1.87
UBCP0CG48 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.39□□□□□ -1.87
UBCP0CG48 MIR4277-201ENST00000578298 84 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 AL390816.3-201ENST00000604527 1066 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 HMGN2P28-201ENST00000606102 262 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 AL355802.4-201ENST00000607635 548 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.39□□□□□ -1.87
UBCP0CG48 AC073342.3-201ENST00000624211 193 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 AC048347.1-201ENST00000624621 427 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.39□□□□□ -1.87
UBCP0CG48 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.39□□□□□ -1.87
UBCP0CG48 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
UBCP0CG48 AC083865.1-201ENST00000636634 831 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 U6.98-201ENST00000637157 84 ntBASIC3.39□□□□□ -1.87
UBCP0CG48 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
UBCP0CG48 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
UBCP0CG48 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.39□□□□□ -1.87
UBCP0CG48 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UBCP0CG48 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
UBCP0CG48 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UBCP0CG48 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UBCP0CG48 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UBCP0CG48 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UBCP0CG48 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.38□□□□□ -1.87
UBCP0CG48 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.38□□□□□ -1.87
UBCP0CG48 CASC19-261ENST00000641853 1638 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBCP0CG48 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.38□□□□□ -1.87
UBCP0CG48 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBCP0CG48 MIR607-201ENST00000385241 96 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 MIR199A2-201ENST00000385289 110 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 U3.22-201ENST00000391120 215 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UBCP0CG48 RN7SKP285-201ENST00000410137 318 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.38□□□□□ -1.87
UBCP0CG48 AC244098.2-201ENST00000422068 99 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 AL592293.2-201ENST00000422292 996 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 AL691449.1-201ENST00000426570 421 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.38□□□□□ -1.87
UBCP0CG48 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.38□□□□□ -1.87
UBCP0CG48 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.38□□□□□ -1.87
UBCP0CG48 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.38□□□□□ -1.87
UBCP0CG48 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.38□□□□□ -1.87
UBCP0CG48 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms