Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 USP8P1-201ENST00000494673 3183 ntBASIC3.98□□□□□ -1.77
TPM1P09493 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TPM1P09493 AC092326.2-201ENST00000624772 1561 ntBASIC3.98□□□□□ -1.77
TPM1P09493 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TPM1P09493 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
TPM1P09493 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TPM1P09493 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
TPM1P09493 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
TPM1P09493 RNA5SP42-201ENST00000364278 115 ntBASIC3.98□□□□□ -1.77
TPM1P09493 HSPE1P26-201ENST00000405341 275 ntBASIC3.98□□□□□ -1.77
TPM1P09493 RPS7P13-201ENST00000413955 498 ntBASIC3.98□□□□□ -1.77
TPM1P09493 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.98□□□□□ -1.77
TPM1P09493 AL356095.1-201ENST00000417217 199 ntBASIC3.98□□□□□ -1.77
TPM1P09493 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.98□□□□□ -1.77
TPM1P09493 BX679664.1-201ENST00000434429 253 ntBASIC3.98□□□□□ -1.77
TPM1P09493 MTCYBP31-201ENST00000438855 1122 ntBASIC3.98□□□□□ -1.77
TPM1P09493 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.98□□□□□ -1.77
TPM1P09493 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.98□□□□□ -1.77
TPM1P09493 RPS29P33-201ENST00000456717 146 ntBASIC3.98□□□□□ -1.77
TPM1P09493 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.98□□□□□ -1.77
TPM1P09493 AC078918.1-201ENST00000498515 228 ntBASIC3.98□□□□□ -1.77
TPM1P09493 UBE2CP3-201ENST00000502715 450 ntBASIC3.98□□□□□ -1.77
TPM1P09493 AC005921.1-201ENST00000510589 286 ntBASIC3.98□□□□□ -1.77
TPM1P09493 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.98□□□□□ -1.77
TPM1P09493 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.98□□□□□ -1.77
TPM1P09493 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TPM1P09493 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.98□□□□□ -1.77
TPM1P09493 HIGD1AP10-201ENST00000527837 282 ntBASIC3.98□□□□□ -1.77
TPM1P09493 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.98□□□□□ -1.77
TPM1P09493 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.98□□□□□ -1.77
TPM1P09493 ZNF192P1-203ENST00000565888 810 ntBASIC3.98□□□□□ -1.77
TPM1P09493 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.98□□□□□ -1.77
TPM1P09493 AP000919.1-202ENST00000581139 1264 ntBASIC3.98□□□□□ -1.77
TPM1P09493 AC068790.4-201ENST00000602474 263 ntBASIC3.98□□□□□ -1.77
TPM1P09493 AC012557.1-201ENST00000607115 611 ntBASIC3.98□□□□□ -1.77
TPM1P09493 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.98□□□□□ -1.77
TPM1P09493 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.98□□□□□ -1.77
TPM1P09493 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
TPM1P09493 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TPM1P09493 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TPM1P09493 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TPM1P09493 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
TPM1P09493 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
TPM1P09493 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TPM1P09493 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TPM1P09493 AC105402.1-201ENST00000413336 545 ntBASIC3.97□□□□□ -1.77
TPM1P09493 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.97□□□□□ -1.77
TPM1P09493 AC017079.2-201ENST00000416102 485 ntBASIC3.97□□□□□ -1.77
TPM1P09493 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.97□□□□□ -1.77
TPM1P09493 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.97□□□□□ -1.77
TPM1P09493 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.97□□□□□ -1.77
TPM1P09493 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TPM1P09493 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.97□□□□□ -1.77
TPM1P09493 RPS3AP46-201ENST00000448352 682 ntBASIC3.97□□□□□ -1.77
TPM1P09493 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.97□□□□□ -1.77
TPM1P09493 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.97□□□□□ -1.77
TPM1P09493 RPS27P29-201ENST00000463110 252 ntBASIC3.97□□□□□ -1.77
TPM1P09493 AC022034.3-201ENST00000471393 478 ntBASIC3.97□□□□□ -1.77
TPM1P09493 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.97□□□□□ -1.77
TPM1P09493 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.97□□□□□ -1.77
TPM1P09493 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.97□□□□□ -1.77
TPM1P09493 AC006518.1-201ENST00000541449 943 ntBASIC3.97□□□□□ -1.77
TPM1P09493 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.97□□□□□ -1.77
TPM1P09493 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.97□□□□□ -1.77
TPM1P09493 MIR3939-201ENST00000582614 106 ntBASIC3.97□□□□□ -1.77
TPM1P09493 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.97□□□□□ -1.77
TPM1P09493 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.97□□□□□ -1.77
TPM1P09493 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TPM1P09493 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.97□□□□□ -1.77
TPM1P09493 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.97□□□□□ -1.77
TPM1P09493 MIR6867-201ENST00000610636 67 ntBASIC3.97□□□□□ -1.77
TPM1P09493 MIR6730-201ENST00000622213 67 ntBASIC3.97□□□□□ -1.77
TPM1P09493 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.97□□□□□ -1.77
TPM1P09493 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.97□□□□□ -1.77
TPM1P09493 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.97□□□□□ -1.77
TPM1P09493 AL513302.2-201ENST00000562313 1842 ntBASIC3.97□□□□□ -1.77
TPM1P09493 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TPM1P09493 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TPM1P09493 SNORA31-201ENST00000362607 130 ntBASIC3.96□□□□□ -1.78
TPM1P09493 AP002088.1-201ENST00000382740 395 ntBASIC3.96□□□□□ -1.78
TPM1P09493 RNA5SP293-201ENST00000410527 113 ntBASIC3.96□□□□□ -1.78
TPM1P09493 RPL18P10-201ENST00000425606 538 ntBASIC3.96□□□□□ -1.78
TPM1P09493 AC074367.1-201ENST00000438685 1125 ntBASIC3.96□□□□□ -1.78
TPM1P09493 AL627224.1-201ENST00000448334 444 ntBASIC3.96□□□□□ -1.78
TPM1P09493 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.96□□□□□ -1.78
TPM1P09493 AC146507.1-201ENST00000468335 354 ntBASIC3.96□□□□□ -1.78
TPM1P09493 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.96□□□□□ -1.78
TPM1P09493 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.96□□□□□ -1.78
TPM1P09493 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.96□□□□□ -1.78
TPM1P09493 AC021087.2-201ENST00000504656 1203 ntBASIC3.96□□□□□ -1.78
TPM1P09493 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.96□□□□□ -1.78
TPM1P09493 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.96□□□□□ -1.78
TPM1P09493 FABP5P12-201ENST00000515543 389 ntBASIC3.96□□□□□ -1.78
TPM1P09493 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.96□□□□□ -1.78
TPM1P09493 RNU6-579P-201ENST00000516879 102 ntBASIC3.96□□□□□ -1.78
TPM1P09493 RNU4-60P-201ENST00000517239 135 ntBASIC3.96□□□□□ -1.78
TPM1P09493 UBE2NP1-201ENST00000545592 458 ntBASIC3.96□□□□□ -1.78
TPM1P09493 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
TPM1P09493 AC023161.2-201ENST00000551218 780 ntBASIC3.96□□□□□ -1.78
TPM1P09493 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms