Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGB1P09429 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
HMGB1P09429 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HMGB1P09429 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HMGB1P09429 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
HMGB1P09429 RNU6-1074P-201ENST00000383995 104 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGB1P09429 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGB1P09429 CYP4F29P-201ENST00000420685 446 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 E2F6P2-201ENST00000420708 748 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMGB1P09429 RBMY2QP-201ENST00000429799 1147 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGB1P09429 CYCSP43-201ENST00000438233 310 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.7□□□□□ -1.5
HMGB1P09429 RRM2P4-201ENST00000441721 562 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 AC112498.1-201ENST00000444401 332 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 AC108463.1-201ENST00000450258 347 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 ZNF886P-201ENST00000450781 723 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMGB1P09429 ZFRP1-201ENST00000457579 2970 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 CEACAMP4-201ENST00000457676 421 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.7□□□□□ -1.5
HMGB1P09429 AC053481.1-201ENST00000467217 306 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 RPS4XP14-201ENST00000493072 781 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 TRAV31-201ENST00000502780 342 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 MTCYBP17-201ENST00000503579 789 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 AC073358.1-201ENST00000505671 684 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.7□□□□□ -1.5
HMGB1P09429 SYF2P1-201ENST00000550658 413 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGB1P09429 AC023813.2-201ENST00000564321 469 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 ZNF192P1-203ENST00000565888 810 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 MIR4637-201ENST00000582405 84 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.7□□□□□ -1.5
HMGB1P09429 AC245036.5-201ENST00000596330 847 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 BNIP3P26-201ENST00000600827 554 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 MTND3P19-201ENST00000603825 345 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 AC010738.1-201ENST00000604970 987 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 AC016877.3-201ENST00000606778 504 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 RNU4-5P-201ENST00000607255 135 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 AC022960.3-201ENST00000619794 441 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 AC068870.2-201ENST00000620635 389 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
HMGB1P09429 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGB1P09429 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGB1P09429 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGB1P09429 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.7□□□□□ -1.5
HMGB1P09429 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMGB1P09429 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HMGB1P09429 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGB1P09429 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.7□□□□□ -1.5
HMGB1P09429 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.7□□□□□ -1.5
HMGB1P09429 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HMGB1P09429 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB1P09429 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB1P09429 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGB1P09429 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HMGB1P09429 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HMGB1P09429 ZNF29P-201ENST00000225587 168 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 RNA5SP123-201ENST00000363244 119 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 RNU4-68P-201ENST00000364314 141 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 SPTLC1P2-201ENST00000407089 121 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 RNA5SP80-201ENST00000410475 111 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGB1P09429 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGB1P09429 NANOGP5-201ENST00000424456 877 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 AC092648.1-201ENST00000425870 423 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB1P09429 AL050321.1-201ENST00000432363 400 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 MTND2P19-201ENST00000449129 1012 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 AC005297.2-201ENST00000450430 606 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 AC234781.3-201ENST00000452540 973 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 AL445669.2-201ENST00000454425 421 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 AC092155.2-201ENST00000454675 477 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 AL591473.1-201ENST00000464297 313 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGB1P09429 RN7SKP46-201ENST00000515942 234 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGB1P09429 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGB1P09429 GCSHP4-201ENST00000538792 439 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 AC087477.6-201ENST00000559595 843 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGB1P09429 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.69□□□□□ -1.5
HMGB1P09429 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.69□□□□□ -1.5
HMGB1P09429 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGB1P09429 MTCO2P2-201ENST00000591258 225 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 BNIP3P11-201ENST00000603878 563 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 SDR42E1P1-201ENST00000611327 477 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGB1P09429 AL355480.1-201ENST00000629041 99 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
HMGB1P09429 AC024560.2-201ENST00000507981 1497 ntBASIC5.69□□□□□ -1.5
HMGB1P09429 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGB1P09429 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB1P09429 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGB1P09429 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB1P09429 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGB1P09429 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms