Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ZNF663P-202ENST00000641770 1131 ntBASIC4.3□□□□□ -1.72
LDLRP01130 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.3□□□□□ -1.72
LDLRP01130 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LDLRP01130 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LDLRP01130 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.3□□□□□ -1.72
LDLRP01130 AC138393.1-206ENST00000540997 1886 ntBASIC4.3□□□□□ -1.72
LDLRP01130 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LDLRP01130 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.3□□□□□ -1.72
LDLRP01130 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LDLRP01130 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LDLRP01130 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LDLRP01130 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LDLRP01130 AC119744.1-201ENST00000454746 1715 ntBASIC4.29□□□□□ -1.72
LDLRP01130 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.29□□□□□ -1.72
LDLRP01130 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LDLRP01130 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
LDLRP01130 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.29□□□□□ -1.72
LDLRP01130 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.29□□□□□ -1.72
LDLRP01130 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.29□□□□□ -1.72
LDLRP01130 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LDLRP01130 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LDLRP01130 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
LDLRP01130 RNU1-15P-201ENST00000353977 144 ntBASIC4.29□□□□□ -1.72
LDLRP01130 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
LDLRP01130 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LDLRP01130 Y_RNA.472-201ENST00000384322 102 ntBASIC4.29□□□□□ -1.72
LDLRP01130 SNORA70C-201ENST00000384538 135 ntBASIC4.29□□□□□ -1.72
LDLRP01130 MIR708-201ENST00000390708 88 ntBASIC4.29□□□□□ -1.72
LDLRP01130 RPL32P23-201ENST00000397237 405 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AL078604.1-201ENST00000404609 466 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AL445189.1-201ENST00000405722 338 ntBASIC4.29□□□□□ -1.72
LDLRP01130 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.29□□□□□ -1.72
LDLRP01130 RNU4-22P-201ENST00000411058 166 ntBASIC4.29□□□□□ -1.72
LDLRP01130 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.29□□□□□ -1.72
LDLRP01130 HIGD1AP15-201ENST00000416198 280 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AC004552.1-201ENST00000419089 348 ntBASIC4.29□□□□□ -1.72
LDLRP01130 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.29□□□□□ -1.72
LDLRP01130 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.29□□□□□ -1.72
LDLRP01130 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.29□□□□□ -1.72
LDLRP01130 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.29□□□□□ -1.72
LDLRP01130 HIGD1AP12-201ENST00000427832 281 ntBASIC4.29□□□□□ -1.72
LDLRP01130 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.29□□□□□ -1.72
LDLRP01130 AL035246.1-201ENST00000433554 1255 ntBASIC4.29□□□□□ -1.72
LDLRP01130 HLA-N-201ENST00000437516 135 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.29□□□□□ -1.72
LDLRP01130 HMGB3P21-201ENST00000452483 547 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AC079168.2-201ENST00000453977 416 ntBASIC4.29□□□□□ -1.72
LDLRP01130 PTGES3P5-201ENST00000455109 434 ntBASIC4.29□□□□□ -1.72
LDLRP01130 BX248409.1-201ENST00000455497 255 ntBASIC4.29□□□□□ -1.72
LDLRP01130 RPS26P3-201ENST00000470205 348 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AC006511.1-201ENST00000470614 315 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AC090543.2-201ENST00000483963 348 ntBASIC4.29□□□□□ -1.72
LDLRP01130 MTCO3P35-201ENST00000485582 781 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AC004057.1-201ENST00000485827 348 ntBASIC4.29□□□□□ -1.72
LDLRP01130 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.29□□□□□ -1.72
LDLRP01130 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.29□□□□□ -1.72
LDLRP01130 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.29□□□□□ -1.72
LDLRP01130 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.29□□□□□ -1.72
LDLRP01130 IFITM8P-201ENST00000522529 394 ntBASIC4.29□□□□□ -1.72
LDLRP01130 MTCO3P15-201ENST00000526563 574 ntBASIC4.29□□□□□ -1.72
LDLRP01130 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LDLRP01130 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.29□□□□□ -1.72
LDLRP01130 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.29□□□□□ -1.72
LDLRP01130 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LDLRP01130 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.29□□□□□ -1.72
LDLRP01130 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.29□□□□□ -1.72
LDLRP01130 AC069061.3-201ENST00000582254 823 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AC090312.2-201ENST00000582687 378 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AC110743.1-201ENST00000584870 478 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.29□□□□□ -1.72
LDLRP01130 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
LDLRP01130 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.29□□□□□ -1.72
LDLRP01130 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.29□□□□□ -1.72
LDLRP01130 AC245036.5-201ENST00000596330 847 ntBASIC4.29□□□□□ -1.72
LDLRP01130 VN1R88P-201ENST00000596787 292 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AC110760.3-201ENST00000598794 467 ntBASIC4.29□□□□□ -1.72
LDLRP01130 GAS5-AS1-201ENST00000602767 694 ntBASIC4.29□□□□□ -1.72
LDLRP01130 NTAN1P1-201ENST00000603150 646 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AC245008.1-201ENST00000608123 476 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AC009237.15-201ENST00000610252 501 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AC122108.2-201ENST00000611946 526 ntBASIC4.29□□□□□ -1.72
LDLRP01130 ZYXP1-201ENST00000617638 118 ntBASIC4.29□□□□□ -1.72
LDLRP01130 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.29□□□□□ -1.72
LDLRP01130 AC000123.2-201ENST00000623124 461 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AL512506.2-201ENST00000624472 458 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.29□□□□□ -1.72
LDLRP01130 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LDLRP01130 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LDLRP01130 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
LDLRP01130 AL353743.4-201ENST00000422653 1547 ntBASIC4.29□□□□□ -1.72
LDLRP01130 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
LDLRP01130 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LDLRP01130 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LDLRP01130 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.29□□□□□ -1.72
LDLRP01130 AC011266.1-201ENST00000624119 3569 ntBASIC4.29□□□□□ -1.72
LDLRP01130 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
LDLRP01130 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
LDLRP01130 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LDLRP01130 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.28□□□□□ -1.72
LDLRP01130 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 215.5 ms