Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 OR4R3P-201ENST00000525084 838 ntBASIC2.68□□□□□ -1.98
SSSCA1O60232 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SSSCA1O60232 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.68□□□□□ -1.98
SSSCA1O60232 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SSSCA1O60232 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.68□□□□□ -1.98
SSSCA1O60232 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.68□□□□□ -1.98
SSSCA1O60232 MTND2P17-201ENST00000550281 688 ntBASIC2.68□□□□□ -1.98
SSSCA1O60232 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.68□□□□□ -1.98
SSSCA1O60232 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.68□□□□□ -1.98
SSSCA1O60232 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.68□□□□□ -1.98
SSSCA1O60232 AC068714.1-201ENST00000559623 800 ntBASIC2.68□□□□□ -1.98
SSSCA1O60232 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.68□□□□□ -1.98
SSSCA1O60232 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.68□□□□□ -1.98
SSSCA1O60232 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC2.68□□□□□ -1.98
SSSCA1O60232 AC006270.2-201ENST00000578523 652 ntBASIC2.68□□□□□ -1.98
SSSCA1O60232 MIR4512-201ENST00000583257 77 ntBASIC2.68□□□□□ -1.98
SSSCA1O60232 ABI1P1-201ENST00000603375 1120 ntBASIC2.68□□□□□ -1.98
SSSCA1O60232 AL365400.2-201ENST00000605604 902 ntBASIC2.68□□□□□ -1.98
SSSCA1O60232 AL589935.2-201ENST00000616471 1231 ntBASIC2.68□□□□□ -1.98
SSSCA1O60232 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.68□□□□□ -1.98
SSSCA1O60232 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.68□□□□□ -1.98
SSSCA1O60232 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SSSCA1O60232 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
SSSCA1O60232 AC119744.1-201ENST00000454746 1715 ntBASIC2.68□□□□□ -1.98
SSSCA1O60232 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SSSCA1O60232 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SSSCA1O60232 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
SSSCA1O60232 MTND5P24-201ENST00000438892 1767 ntBASIC2.67□□□□□ -1.98
SSSCA1O60232 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.67□□□□□ -1.98
SSSCA1O60232 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.67□□□□□ -1.98
SSSCA1O60232 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SSSCA1O60232 RNU1-32P-201ENST00000363937 159 ntBASIC2.67□□□□□ -1.98
SSSCA1O60232 RNA5SP51-201ENST00000364750 119 ntBASIC2.67□□□□□ -1.98
SSSCA1O60232 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.67□□□□□ -1.98
SSSCA1O60232 AC007066.1-201ENST00000392902 381 ntBASIC2.67□□□□□ -1.98
SSSCA1O60232 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.67□□□□□ -1.98
SSSCA1O60232 RNU6-628P-201ENST00000410675 107 ntBASIC2.67□□□□□ -1.98
SSSCA1O60232 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SSSCA1O60232 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.67□□□□□ -1.98
SSSCA1O60232 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.67□□□□□ -1.98
SSSCA1O60232 HMGB3P6-201ENST00000444896 598 ntBASIC2.67□□□□□ -1.98
SSSCA1O60232 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.67□□□□□ -1.98
SSSCA1O60232 U3.44-201ENST00000458938 192 ntBASIC2.67□□□□□ -1.98
SSSCA1O60232 SNORD108-201ENST00000459332 71 ntBASIC2.67□□□□□ -1.98
SSSCA1O60232 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.67□□□□□ -1.98
SSSCA1O60232 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.67□□□□□ -1.98
SSSCA1O60232 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SSSCA1O60232 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.67□□□□□ -1.98
SSSCA1O60232 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.67□□□□□ -1.98
SSSCA1O60232 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.67□□□□□ -1.98
SSSCA1O60232 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.67□□□□□ -1.98
SSSCA1O60232 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.67□□□□□ -1.98
SSSCA1O60232 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SSSCA1O60232 AC010591.1-201ENST00000603941 649 ntBASIC2.67□□□□□ -1.98
SSSCA1O60232 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.67□□□□□ -1.98
SSSCA1O60232 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SSSCA1O60232 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC2.67□□□□□ -1.98
SSSCA1O60232 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.67□□□□□ -1.98
SSSCA1O60232 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.67□□□□□ -1.98
SSSCA1O60232 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SSSCA1O60232 CR383658.2-201ENST00000547576 1525 ntBASIC2.67□□□□□ -1.98
SSSCA1O60232 AC138393.1-206ENST00000540997 1886 ntBASIC2.67□□□□□ -1.98
SSSCA1O60232 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SSSCA1O60232 AL133383.2-201ENST00000622958 2336 ntBASIC2.67□□□□□ -1.98
SSSCA1O60232 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SSSCA1O60232 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SSSCA1O60232 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.66□□□□□ -1.98
SSSCA1O60232 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SSSCA1O60232 AC093831.2-201ENST00000624393 3427 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
SSSCA1O60232 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
SSSCA1O60232 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SSSCA1O60232 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC2.66□□□□□ -1.98
SSSCA1O60232 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SSSCA1O60232 SNORD3H-201ENST00000384486 214 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 SNORA46-201ENST00000384762 135 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 AL589994.1-201ENST00000404962 340 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.66□□□□□ -1.98
SSSCA1O60232 AC244505.4-201ENST00000434905 287 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.66□□□□□ -1.98
SSSCA1O60232 SSXP5-201ENST00000443473 287 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 HSFY6P-201ENST00000445573 403 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.66□□□□□ -1.98
SSSCA1O60232 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.66□□□□□ -1.98
SSSCA1O60232 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.66□□□□□ -1.98
SSSCA1O60232 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.66□□□□□ -1.98
SSSCA1O60232 RNU6-347P-201ENST00000516658 105 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.66□□□□□ -1.98
SSSCA1O60232 C1GALT1P3-201ENST00000522049 819 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.66□□□□□ -1.98
SSSCA1O60232 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.66□□□□□ -1.98
SSSCA1O60232 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.66□□□□□ -1.98
SSSCA1O60232 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC2.66□□□□□ -1.98
SSSCA1O60232 AL161713.1-201ENST00000555538 145 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 ZNF192P1-203ENST00000565888 810 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC2.66□□□□□ -1.98
SSSCA1O60232 AC053481.4-201ENST00000583164 216 ntBASIC2.66□□□□□ -1.98
SSSCA1O60232 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.66□□□□□ -1.98
SSSCA1O60232 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.66□□□□□ -1.98
SSSCA1O60232 AC099676.1-201ENST00000608886 657 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms