Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.53□□□□□ -1.68
SMAD6O43541 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.53□□□□□ -1.68
SMAD6O43541 COX7BP2-201ENST00000437976 242 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.53□□□□□ -1.68
SMAD6O43541 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.53□□□□□ -1.68
SMAD6O43541 BMI1P1-201ENST00000445879 941 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 RPL7P31-201ENST00000450192 724 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.53□□□□□ -1.68
SMAD6O43541 HMGB3P21-201ENST00000452483 547 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.53□□□□□ -1.68
SMAD6O43541 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SMAD6O43541 RPL23AP44-201ENST00000482216 473 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.53□□□□□ -1.68
SMAD6O43541 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SMAD6O43541 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.53□□□□□ -1.68
SMAD6O43541 AC116353.3-201ENST00000511215 249 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AC119751.1-201ENST00000513357 765 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.53□□□□□ -1.68
SMAD6O43541 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.53□□□□□ -1.68
SMAD6O43541 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.53□□□□□ -1.68
SMAD6O43541 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SMAD6O43541 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.53□□□□□ -1.68
SMAD6O43541 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.53□□□□□ -1.68
SMAD6O43541 AC011611.5-201ENST00000552477 578 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.53□□□□□ -1.68
SMAD6O43541 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.53□□□□□ -1.68
SMAD6O43541 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.53□□□□□ -1.68
SMAD6O43541 AC091178.1-203ENST00000584586 279 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AC110743.1-201ENST00000584870 478 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.53□□□□□ -1.68
SMAD6O43541 AP002906.1-201ENST00000603405 233 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AC103792.1-201ENST00000603591 919 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AC007390.2-201ENST00000606229 3803 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.53□□□□□ -1.68
SMAD6O43541 AC072039.2-201ENST00000608883 439 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AP000254.1-201ENST00000609934 520 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AL121890.3-201ENST00000618494 516 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AP003072.4-201ENST00000624580 310 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 AC006065.6-201ENST00000625201 545 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.53□□□□□ -1.68
SMAD6O43541 AC092104.1-201ENST00000497346 1441 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 MTND5P29-201ENST00000458676 1807 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 NXPH1-205ENST00000602349 1953 ntBASIC4.53□□□□□ -1.68
SMAD6O43541 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
SMAD6O43541 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.52□□□□□ -1.69
SMAD6O43541 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.52□□□□□ -1.69
SMAD6O43541 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.52□□□□□ -1.69
SMAD6O43541 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SMAD6O43541 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.52□□□□□ -1.69
SMAD6O43541 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.52□□□□□ -1.69
SMAD6O43541 AC009951.1-201ENST00000623674 2614 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 AL356489.2-201ENST00000566968 3528 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 RNA5SP509-201ENST00000364577 119 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 RSL24D1P4-201ENST00000400938 484 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.52□□□□□ -1.69
SMAD6O43541 ERHP2-201ENST00000402323 299 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.52□□□□□ -1.69
SMAD6O43541 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.52□□□□□ -1.69
SMAD6O43541 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.52□□□□□ -1.69
SMAD6O43541 C8orf59P1-201ENST00000429930 303 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 RPS29P17-201ENST00000430795 166 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 AC005189.1-201ENST00000431286 310 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.52□□□□□ -1.69
SMAD6O43541 TPTE2P6-202ENST00000445572 1007 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.52□□□□□ -1.69
SMAD6O43541 AC233982.1-201ENST00000451247 436 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.52□□□□□ -1.69
SMAD6O43541 DHFRP3-201ENST00000455595 559 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 ANKRD26P4-201ENST00000455755 950 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 GTF2IP12-201ENST00000456547 356 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 RPL7P32-201ENST00000457119 744 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 AC104689.1-201ENST00000473356 768 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 SYPL1P1-201ENST00000473622 768 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 AC022795.1-201ENST00000473808 480 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
SMAD6O43541 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.52□□□□□ -1.69
SMAD6O43541 RPS4XP18-201ENST00000495480 763 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 AC023050.1-201ENST00000498198 304 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.52□□□□□ -1.69
SMAD6O43541 NRON-201ENST00000517270 370 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.52□□□□□ -1.69
SMAD6O43541 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.52□□□□□ -1.69
SMAD6O43541 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.52□□□□□ -1.69
SMAD6O43541 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMAD6O43541 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.52□□□□□ -1.69
SMAD6O43541 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.52□□□□□ -1.69
SMAD6O43541 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.52□□□□□ -1.69
SMAD6O43541 AGGF1P4-201ENST00000568249 801 ntBASIC4.52□□□□□ -1.69
SMAD6O43541 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms