Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL163193.1-201ENST00000444895 788 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.86□□□□□ -1.63
PHGDHO43175 AC000111.2-201ENST00000448200 210 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.86□□□□□ -1.63
PHGDHO43175 AC026410.2-201ENST00000460281 156 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 RN7SL222P-201ENST00000476452 299 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 AC091965.2-201ENST00000512324 613 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 Y_RNA.655-201ENST00000515919 96 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 Y_RNA.695-201ENST00000516715 107 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.86□□□□□ -1.63
PHGDHO43175 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.86□□□□□ -1.63
PHGDHO43175 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.86□□□□□ -1.63
PHGDHO43175 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.86□□□□□ -1.63
PHGDHO43175 AC087477.6-201ENST00000559595 843 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.86□□□□□ -1.63
PHGDHO43175 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.86□□□□□ -1.63
PHGDHO43175 LARP7P2-201ENST00000575306 125 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.86□□□□□ -1.63
PHGDHO43175 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.86□□□□□ -1.63
PHGDHO43175 AC010857.1-201ENST00000606398 594 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 AL031775.1-201ENST00000607014 887 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 AL391497.1-201ENST00000608671 547 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.86□□□□□ -1.63
PHGDHO43175 MIR8069-1-201ENST00000616627 86 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 MIR8069-2-201ENST00000621412 86 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.86□□□□□ -1.63
PHGDHO43175 AL122126.1-201ENST00000546905 1318 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHGDHO43175 AL390237.1-201ENST00000404226 1415 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 AP002907.1-201ENST00000606361 1430 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.86□□□□□ -1.63
PHGDHO43175 CR383658.2-201ENST00000547576 1525 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PHGDHO43175 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHGDHO43175 AL672167.1-203ENST00000641299 2975 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 PABPC1P6-201ENST00000445594 1829 ntBASIC4.86□□□□□ -1.63
PHGDHO43175 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHGDHO43175 MAPK10-349ENST00000641767 3661 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
PHGDHO43175 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHGDHO43175 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHGDHO43175 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.85□□□□□ -1.63
PHGDHO43175 SNORA51.1-201ENST00000363243 140 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.85□□□□□ -1.63
PHGDHO43175 RNU6-171P-201ENST00000384354 107 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 ARF4P3-201ENST00000397387 509 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 AL512430.2-201ENST00000406786 339 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 U3.36-201ENST00000408418 213 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 TBCAP2-201ENST00000416175 326 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 AC092647.1-201ENST00000420654 287 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 AL138785.1-201ENST00000425821 331 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 OR4F13P-201ENST00000428478 931 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.85□□□□□ -1.63
PHGDHO43175 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.85□□□□□ -1.63
PHGDHO43175 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.85□□□□□ -1.63
PHGDHO43175 AC104073.1-201ENST00000451988 151 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 HMGB3P21-201ENST00000452483 547 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 RN7SL172P-201ENST00000460535 303 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 RPL30P9-201ENST00000465586 330 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 RPL7P22-201ENST00000466005 733 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.85□□□□□ -1.63
PHGDHO43175 AC020890.1-201ENST00000491837 504 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 RN7SL244P-201ENST00000493405 297 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 TMEM251P1-201ENST00000503717 318 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 AC006499.5-201ENST00000505037 514 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.85□□□□□ -1.63
PHGDHO43175 RN7SKP82-201ENST00000516786 223 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 AC060788.1-201ENST00000521318 469 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PHGDHO43175 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.85□□□□□ -1.63
PHGDHO43175 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHGDHO43175 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.85□□□□□ -1.63
PHGDHO43175 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.85□□□□□ -1.63
PHGDHO43175 AP005119.2-201ENST00000579735 1105 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 MIR4691-201ENST00000583764 85 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 AC008507.1-201ENST00000587506 734 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.85□□□□□ -1.63
PHGDHO43175 AC115286.1-201ENST00000604298 434 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 RN7SKP299-201ENST00000606679 301 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.85□□□□□ -1.63
PHGDHO43175 AL022401.1-201ENST00000619498 108 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 AC012414.7-202ENST00000622705 1090 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.85□□□□□ -1.63
PHGDHO43175 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.85□□□□□ -1.63
PHGDHO43175 FAM157B-203ENST00000639350 358 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PHGDHO43175 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PHGDHO43175 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.85□□□□□ -1.63
PHGDHO43175 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PHGDHO43175 AC011978.2-201ENST00000569835 2054 ntBASIC4.85□□□□□ -1.63
PHGDHO43175 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.85□□□□□ -1.63
PHGDHO43175 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.85□□□□□ -1.63
PHGDHO43175 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHGDHO43175 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PHGDHO43175 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
PHGDHO43175 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHGDHO43175 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PHGDHO43175 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.84□□□□□ -1.63
PHGDHO43175 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms