Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.13□□□□□ -1.75
RTCAO00442 AC104763.3-201ENST00000613765 618 ntBASIC4.13□□□□□ -1.75
RTCAO00442 AC105227.2-201ENST00000615075 605 ntBASIC4.13□□□□□ -1.75
RTCAO00442 AL021997.2-201ENST00000615674 271 ntBASIC4.13□□□□□ -1.75
RTCAO00442 AC004808.1-201ENST00000627671 721 ntBASIC4.13□□□□□ -1.75
RTCAO00442 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.13□□□□□ -1.75
RTCAO00442 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RTCAO00442 AP001148.1-201ENST00000624124 2359 ntBASIC4.13□□□□□ -1.75
RTCAO00442 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.13□□□□□ -1.75
RTCAO00442 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.13□□□□□ -1.75
RTCAO00442 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
RTCAO00442 AF127577.6-201ENST00000623352 2191 ntBASIC4.13□□□□□ -1.75
RTCAO00442 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RTCAO00442 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RTCAO00442 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTCAO00442 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RTCAO00442 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTCAO00442 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.12□□□□□ -1.75
RTCAO00442 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTCAO00442 RNU5B-4P-201ENST00000363508 111 ntBASIC4.12□□□□□ -1.75
RTCAO00442 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.12□□□□□ -1.75
RTCAO00442 VN1R8P-201ENST00000407739 893 ntBASIC4.12□□□□□ -1.75
RTCAO00442 NRBF2P2-201ENST00000413087 861 ntBASIC4.12□□□□□ -1.75
RTCAO00442 RPL21P108-201ENST00000413857 481 ntBASIC4.12□□□□□ -1.75
RTCAO00442 P2RY10P2-201ENST00000416730 913 ntBASIC4.12□□□□□ -1.75
RTCAO00442 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.12□□□□□ -1.75
RTCAO00442 RPS27AP7-201ENST00000422792 455 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC233981.1-201ENST00000423224 461 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AL009174.1-201ENST00000426577 416 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC073335.1-201ENST00000427776 363 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC017083.1-201ENST00000428093 483 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC011998.1-201ENST00000433403 117 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC010881.1-201ENST00000433830 235 ntBASIC4.12□□□□□ -1.75
RTCAO00442 HMGB1P12-201ENST00000438594 598 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC069285.2-201ENST00000440210 275 ntBASIC4.12□□□□□ -1.75
RTCAO00442 HSFY3P-201ENST00000444242 1191 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AL929288.2-201ENST00000446368 407 ntBASIC4.12□□□□□ -1.75
RTCAO00442 Z95152.1-201ENST00000453556 656 ntBASIC4.12□□□□□ -1.75
RTCAO00442 RPS15AP1-201ENST00000457423 391 ntBASIC4.12□□□□□ -1.75
RTCAO00442 RPL23AP24-201ENST00000458203 385 ntBASIC4.12□□□□□ -1.75
RTCAO00442 RN7SL98P-201ENST00000462271 300 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC025674.1-201ENST00000507074 324 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC005798.1-201ENST00000513715 387 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC008694.2-201ENST00000517591 306 ntBASIC4.12□□□□□ -1.75
RTCAO00442 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.12□□□□□ -1.75
RTCAO00442 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.12□□□□□ -1.75
RTCAO00442 CR383656.6-201ENST00000550518 394 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC004217.3-201ENST00000551552 878 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.12□□□□□ -1.75
RTCAO00442 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.12□□□□□ -1.75
RTCAO00442 RN7SL622P-201ENST00000585292 275 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.12□□□□□ -1.75
RTCAO00442 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.12□□□□□ -1.75
RTCAO00442 AC011492.1-201ENST00000600023 315 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC105148.1-201ENST00000604961 409 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC103710.3-201ENST00000608157 948 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.12□□□□□ -1.75
RTCAO00442 AP004247.3-201ENST00000608682 624 ntBASIC4.12□□□□□ -1.75
RTCAO00442 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.12□□□□□ -1.75
RTCAO00442 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.12□□□□□ -1.75
RTCAO00442 uc_338.13-201ENST00000618243 179 ntBASIC4.12□□□□□ -1.75
RTCAO00442 AC126544.2-201ENST00000625174 749 ntBASIC4.12□□□□□ -1.75
RTCAO00442 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RTCAO00442 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RTCAO00442 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.12□□□□□ -1.75
RTCAO00442 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.12□□□□□ -1.75
RTCAO00442 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RTCAO00442 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.12□□□□□ -1.75
RTCAO00442 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
RTCAO00442 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTCAO00442 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTCAO00442 MFSD8-242ENST00000641690 4199 ntBASIC4.11□□□□□ -1.75
RTCAO00442 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
RTCAO00442 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RTCAO00442 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RTCAO00442 RNU1-15P-201ENST00000353977 144 ntBASIC4.11□□□□□ -1.75
RTCAO00442 RNA5SP175-201ENST00000364275 119 ntBASIC4.11□□□□□ -1.75
RTCAO00442 ELOCP19-201ENST00000411919 318 ntBASIC4.11□□□□□ -1.75
RTCAO00442 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.11□□□□□ -1.75
RTCAO00442 UBTFL3-201ENST00000418934 1024 ntBASIC4.11□□□□□ -1.75
RTCAO00442 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.11□□□□□ -1.75
RTCAO00442 MTND2P9-201ENST00000422293 931 ntBASIC4.11□□□□□ -1.75
RTCAO00442 PDSS1P1-201ENST00000422953 1114 ntBASIC4.11□□□□□ -1.75
RTCAO00442 PTP4A1P7-201ENST00000423476 514 ntBASIC4.11□□□□□ -1.75
RTCAO00442 SKP1P3-201ENST00000429280 487 ntBASIC4.11□□□□□ -1.75
RTCAO00442 ELOCP18-201ENST00000434209 337 ntBASIC4.11□□□□□ -1.75
RTCAO00442 AC000041.1-201ENST00000439655 175 ntBASIC4.11□□□□□ -1.75
RTCAO00442 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.11□□□□□ -1.75
RTCAO00442 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.11□□□□□ -1.75
RTCAO00442 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.11□□□□□ -1.75
RTCAO00442 snoU13.3-201ENST00000459441 104 ntBASIC4.11□□□□□ -1.75
RTCAO00442 AC079804.1-201ENST00000461922 436 ntBASIC4.11□□□□□ -1.75
RTCAO00442 UBTFL6-201ENST00000477929 1024 ntBASIC4.11□□□□□ -1.75
RTCAO00442 RPS4XP13-201ENST00000483219 789 ntBASIC4.11□□□□□ -1.75
RTCAO00442 RPS23P1-201ENST00000491662 432 ntBASIC4.11□□□□□ -1.75
RTCAO00442 CAB39P1-201ENST00000502277 460 ntBASIC4.11□□□□□ -1.75
RTCAO00442 AC146944.2-203ENST00000502493 354 ntBASIC4.11□□□□□ -1.75
RTCAO00442 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.11□□□□□ -1.75
RTCAO00442 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.11□□□□□ -1.75
RTCAO00442 AC069306.1-201ENST00000507006 843 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms