Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 FDX1P1-201ENST00000449115 551 ntBASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 AC092597.1-201ENST00000487352 616 ntBASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
RTCBQ9Y3I0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC24.37■■□□□ 1.49
RTCBQ9Y3I0 ANKRD18DP-204ENST00000455355 1975 ntBASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 AL845331.1-201ENST00000424978 1190 ntBASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 TSSC2-201ENST00000450217 709 ntBASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 AC034232.1-201ENST00000506026 1064 ntBASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 AC111152.3-201ENST00000569699 673 ntBASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.36■■□□□ 1.49
RTCBQ9Y3I0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 AC004870.1-201ENST00000315132 882 ntBASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RTCBQ9Y3I0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 AC011498.5-201ENST00000592027 486 ntBASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
RTCBQ9Y3I0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC24.33■■□□□ 1.49
RTCBQ9Y3I0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC24.33■■□□□ 1.49
RTCBQ9Y3I0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RTCBQ9Y3I0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
RTCBQ9Y3I0 AC016734.2-201ENST00000624325 1377 ntBASIC24.33■■□□□ 1.49
RTCBQ9Y3I0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RTCBQ9Y3I0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC24.33■■□□□ 1.49
RTCBQ9Y3I0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC24.33■■□□□ 1.49
RTCBQ9Y3I0 BX276092.5-203ENST00000456199 560 ntBASIC24.33■■□□□ 1.49
RTCBQ9Y3I0 AL121672.3-201ENST00000608644 468 ntBASIC24.33■■□□□ 1.49
RTCBQ9Y3I0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RTCBQ9Y3I0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RTCBQ9Y3I0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RTCBQ9Y3I0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
RTCBQ9Y3I0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
RTCBQ9Y3I0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC24.33■■□□□ 1.48
RTCBQ9Y3I0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
RTCBQ9Y3I0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
RTCBQ9Y3I0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RTCBQ9Y3I0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms