Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3H4Q9UPT8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3H4Q9UPT8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3H4Q9UPT8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
ZC3H4Q9UPT8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
ZC3H4Q9UPT8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC23.4■■□□□ 1.34
ZC3H4Q9UPT8 KRT8P41-201ENST00000533985 1514 ntBASIC23.4■■□□□ 1.34
ZC3H4Q9UPT8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
ZC3H4Q9UPT8 AC092597.1-201ENST00000487352 616 ntBASIC23.39■■□□□ 1.34
ZC3H4Q9UPT8 BMF-207ENST00000559701 630 ntTSL 3 BASIC23.39■■□□□ 1.34
ZC3H4Q9UPT8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
ZC3H4Q9UPT8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
ZC3H4Q9UPT8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.39■■□□□ 1.33
ZC3H4Q9UPT8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.39■■□□□ 1.33
ZC3H4Q9UPT8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.39■■□□□ 1.33
ZC3H4Q9UPT8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
ZC3H4Q9UPT8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
ZC3H4Q9UPT8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 RPP21-221ENST00000428040 594 ntTSL 2 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 DRAXINP1-201ENST00000437611 948 ntBASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.38■■□□□ 1.33
ZC3H4Q9UPT8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ZC3H4Q9UPT8 AC005229.4-201ENST00000610085 2198 ntBASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 PENK-208ENST00000523051 772 ntTSL 5 BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 AC120114.3-201ENST00000611923 658 ntBASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ZC3H4Q9UPT8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 KRT18P31-201ENST00000506277 1292 ntBASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 AC012615.1-201ENST00000565797 1299 ntBASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 AL121912.1-201ENST00000603683 238 ntBASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.35■■□□□ 1.33
ZC3H4Q9UPT8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms