Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTSFQ9UBX1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.17■□□□□ 0.5
CTSFQ9UBX1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CTSFQ9UBX1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 C2orf69P3-201ENST00000565542 1120 ntBASIC18.16■□□□□ 0.5
CTSFQ9UBX1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 KRT8P41-201ENST00000533985 1514 ntBASIC18.16■□□□□ 0.5
CTSFQ9UBX1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTSFQ9UBX1 AC096733.2-201ENST00000609937 1394 ntBASIC18.16■□□□□ 0.5
CTSFQ9UBX1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 AC005363.2-201ENST00000618631 242 ntBASIC18.15■□□□□ 0.5
CTSFQ9UBX1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 KRT18P22-201ENST00000402024 1347 ntBASIC18.15■□□□□ 0.5
CTSFQ9UBX1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CTSFQ9UBX1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTSFQ9UBX1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTSFQ9UBX1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CTSFQ9UBX1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.14■□□□□ 0.5
CTSFQ9UBX1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.14■□□□□ 0.5
CTSFQ9UBX1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CTSFQ9UBX1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms