Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 B3GAT3P1-201ENST00000471720 806 ntBASIC19.91■□□□□ 0.78
RPRD1AQ96P16 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 Z85996.1-201ENST00000494644 937 ntBASIC19.91■□□□□ 0.78
RPRD1AQ96P16 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 RCC2P6-201ENST00000526625 1557 ntBASIC19.91■□□□□ 0.78
RPRD1AQ96P16 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.91■□□□□ 0.78
RPRD1AQ96P16 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 AC104417.2-201ENST00000562989 1793 ntBASIC19.9■□□□□ 0.78
RPRD1AQ96P16 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 TSPY15P-201ENST00000457163 923 ntBASIC19.9■□□□□ 0.78
RPRD1AQ96P16 AC011506.1-201ENST00000474329 610 ntBASIC19.9■□□□□ 0.78
RPRD1AQ96P16 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPRD1AQ96P16 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 MESTP1-201ENST00000404287 994 ntBASIC19.89■□□□□ 0.77
RPRD1AQ96P16 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 AC004951.3-201ENST00000418645 1148 ntBASIC19.89■□□□□ 0.77
RPRD1AQ96P16 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPRD1AQ96P16 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 UNC93B2-201ENST00000285383 730 ntBASIC19.88■□□□□ 0.77
RPRD1AQ96P16 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 RBM17P1-201ENST00000453646 1190 ntBASIC19.88■□□□□ 0.77
RPRD1AQ96P16 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 AC011298.2-201ENST00000617989 482 ntBASIC19.88■□□□□ 0.77
RPRD1AQ96P16 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPRD1AQ96P16 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms