Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 AP000867.3-201ENST00000524675 377 ntBASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CNTNAP3BQ96NU0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 AC073130.3-201ENST00000624389 2278 ntBASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 RPS8P6-201ENST00000426177 609 ntBASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CNTNAP3BQ96NU0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 AC073648.2-201ENST00000510116 352 ntBASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 PGAM5P1-201ENST00000518923 814 ntBASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 TPSP2-201ENST00000561760 610 ntBASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 AC106730.1-201ENST00000566722 1090 ntBASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 AC139530.1-201ENST00000575312 1977 ntBASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CNTNAP3BQ96NU0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 AC098831.1-202ENST00000438821 336 ntBASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.41■□□□□ 0.54
CNTNAP3BQ96NU0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms