Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.97■□□□□ 0.63
LYSMD4Q5XG99 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LYSMD4Q5XG99 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 AIRN-201ENST00000601203 4374 ntBASIC18.95■□□□□ 0.62
LYSMD4Q5XG99 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 AC092119.3-201ENST00000612618 583 ntBASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LYSMD4Q5XG99 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 AL645929.1-201ENST00000420084 975 ntBASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 AC034232.1-201ENST00000506026 1064 ntBASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 MIR4674-201ENST00000582457 87 ntBASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.93■□□□□ 0.62
LYSMD4Q5XG99 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 HBZP1-201ENST00000354915 429 ntBASIC18.92■□□□□ 0.62
LYSMD4Q5XG99 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms