Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
MID1O15344 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MID1O15344 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.35■□□□□ 0.69
MID1O15344 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
MID1O15344 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MID1O15344 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.35■□□□□ 0.69
MID1O15344 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.35■□□□□ 0.69
MID1O15344 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MID1O15344 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.35■□□□□ 0.69
MID1O15344 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
MID1O15344 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.34■□□□□ 0.69
MID1O15344 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MID1O15344 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.34■□□□□ 0.69
MID1O15344 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MID1O15344 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.34■□□□□ 0.69
MID1O15344 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.34■□□□□ 0.69
MID1O15344 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 CKBP1-201ENST00000565489 1086 ntBASIC19.34■□□□□ 0.69
MID1O15344 AL023803.3-201ENST00000615559 522 ntBASIC19.34■□□□□ 0.69
MID1O15344 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
MID1O15344 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 AC092338.2-201ENST00000568827 1415 ntBASIC19.34■□□□□ 0.69
MID1O15344 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
MID1O15344 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.33■□□□□ 0.69
MID1O15344 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.33■□□□□ 0.69
MID1O15344 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MID1O15344 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
MID1O15344 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.33■□□□□ 0.69
MID1O15344 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MID1O15344 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MID1O15344 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MID1O15344 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MID1O15344 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MID1O15344 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MID1O15344 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MID1O15344 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
MID1O15344 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MID1O15344 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
MID1O15344 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MID1O15344 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
MID1O15344 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.33■□□□□ 0.68
MID1O15344 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MID1O15344 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MID1O15344 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MID1O15344 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MID1O15344 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MID1O15344 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.33■□□□□ 0.68
MID1O15344 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MID1O15344 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.32■□□□□ 0.68
MID1O15344 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.32■□□□□ 0.68
MID1O15344 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MID1O15344 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.32■□□□□ 0.68
MID1O15344 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MID1O15344 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
MID1O15344 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MID1O15344 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
MID1O15344 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.32■□□□□ 0.68
MID1O15344 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.32■□□□□ 0.68
MID1O15344 AC010653.2-201ENST00000623505 997 ntBASIC19.32■□□□□ 0.68
MID1O15344 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MID1O15344 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MID1O15344 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MID1O15344 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
MID1O15344 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MID1O15344 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
MID1O15344 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MID1O15344 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MID1O15344 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.32■□□□□ 0.68
MID1O15344 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MID1O15344 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
MID1O15344 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MID1O15344 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MID1O15344 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MID1O15344 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.31■□□□□ 0.68
MID1O15344 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MID1O15344 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
MID1O15344 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
MID1O15344 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.31■□□□□ 0.68
MID1O15344 TSPY17P-201ENST00000450329 467 ntBASIC19.31■□□□□ 0.68
MID1O15344 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.31■□□□□ 0.68
MID1O15344 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MID1O15344 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms